Published May 21, 2022
| Version 1.0
Dataset
Open
FuTRES (Functional Trait Resource for Environmental Studies) data store archival copy - 5/21/2022
Authors/Creators
- 1. Florida Museum of Natural History
- 2. University of Arizona and Battelle
- 3. University of California Berkeley
- 4. University of Oregon
- 5. Howard University
- 6. University of Arizona
Description
The Functional Trait Resource for Environmental Studies (FuTRES) project is a collaborative project among four universities (University of Oregon, University of Arizona, University of Florida, and Howard University). The key deliverables of FuTRES are a workflow for assembling functional trait data measured at the specimen level, a database to serve that data, and scientific publications demonstrating the utility of the assembled data. This dataset represents the FuTRES datastore as of 5/21/2022, providing an archive that is timestamped and providing all data that is not currently embargoed by providers. The column headers for FuTRES data are: basisOfRecord,catalogNumber,class,collectionCode,country,decimalLatitude,decimalLongitude,diagnosticID,eventID,family,genus,individualID,institutionCode,lifeStage,locality,mapped_project,materialSampleID,maximumChronometricAge,maximumChronometricAgeReferenceSystem,maximumElevationInMeters,measurementMethod,measurementSide,measurementType,measurementUnit,measurementValue,minimumChronometricAge,minimumChronometricAgeReferenceSystem,minimumElevationInMeters,observationID,occurrenceID,occurrenceRemarks,order,reproductiveCondition,samplingProtocol,scientificName,sex,specificEpithet,stateProvince,verbatimElevation,verbatimEventDate,verbatimLatitude,verbatimLocality,verbatimLongitude,verbatimMeasurementUnit,yearCollected,projectID,inferred_traits. The traits available and number of records for each trait:
- length (1,790,883)
- tail length (520,281)
- body length (456,165)
- pes length (413,668)
- ear length to notch (397,073)
- external ear length (397,073)
- body mass (373,949)
- weight (373,949)
- width (7,429)
- talus width (1,705)
- metacarpal bone of digit 3 proximal articular breadth (783)
- molar tooth 1 occlusal surface width (782)
- metacarpal bone of digit 3 breadth (716)
- metacarpal bone of digit 3 depth (706)
- talus length (649)
- long bone length (637)
- upper secondary molar tooth 1 occlusal surface width (605)
- talus trochlea breadth (596)
- epiphysis width (581)
- talus breadth (560)
- talus medial depth (549)
- tooth row length (498)
- lower tooth row length (425)
- tibia distal width (413)
- molar tooth 1 occlusal surface length (402)
- premolar tooth 4 occlusal surface width (361)
- premolar tooth 3 occlusal surface length (343)
- femur width (301)
- humerus length (297)
- humerus width (293)
- premolar tooth 2 occlusal surface width (261)
- premolar tooth 2 occlusal surface length (260)
- tibia diaphysis width (260)
- molar tooth 2 occlusal surface length (242)
- tibia length (228)
- tibia distal breadth (208)
- tibia distal depth (201)
- molar tooth 2 occlusal surface width (197)
- upper secondary premolar tooth 4 occlusal surface length (187)
- upper secondary premolar tooth 4 occlusal surface width (185)
- premolar tooth 1 occlusal surface length (184)
- premolar tooth 1 occlusal surface width (184)
- premolar tooth 3 occlusal surface width (184)
- upper secondary canine tooth to premolar tooth 3 length (184)
- upper secondary premolar tooth 3 occlusal surface length (184)
- upper secondary premolar tooth 3 occlusal surface width (184)
- upper secondary molar tooth 1 occlusal surface length (180)
- lower secondary molar tooth 1 occlusal surface length (177)
- lower secondary molar tooth 1 occlusal surface width (177)
- lower secondary premolar tooth 4 occlusal surface length (176)
- lower secondary premolar tooth 4 occlusal surface width (176)
- tibia proximal width (162)
- lower secondary premolar tooth 3 occlusal surface length (159)
- upper secondary premolar tooth 2 occlusal surface length (155)
- upper secondary premolar tooth 2 occlusal surface width (155)
- tibia diaphysis breadth (145)
- lower secondary molar tooth 2 occlusal surface length (120)
- lower secondary molar tooth 2 occlusal surface width (119)
- tibia diaphysis depth (111)
- lower secondary premolar tooth 2 occlusal surface width (106)
- lower secondary premolar tooth 2 occlusal surface length (105)
- upper premolar tooth 1 occlusal surface length (105)
- upper secondary premolar tooth 1 occlusal surface length (105)
- upper secondary premolar tooth 1 occlusal surface width (105)
- tibia proximal breadth (85)
- molar tooth 3 occlusal surface length (81)
- lower secondary premolar tooth 1 occlusal surface length (79)
- lower secondary premolar tooth 1 occlusal surface width (79)
- upper secondary molar tooth 2 occlusal surface length (78)
- upper secondary molar tooth 2 occlusal surface width (78)
- humerus trochlea breadth (76)
- humerus medial trochlear height (74)
- humerus trochlear height at sagittal crest (74)
- humerus trochlear sulcus height (74)
- tibia proximal depth (73)
- upper molar tooth 1-2 length (73)
- upper tooth row length (73)
- anterior tibial tuberosity length (70)
- humerus distal depth (69)
- femur length (67)
- ulna width (67)
- tibia medial length (63)
- humerus diaphysis breadth (57)
- humerus diaphysis depth (54)
- lower secondary molar tooth 3 occlusal surface length (51)
- trochlea tali length (49)
- femur diaphysis breadth (45)
- forelimb zeugopod bone length (45)
- femur distal breadth (44)
- ulna length (42)
- femur proximal breadth (40)
- humerus length from trochlea to caput (38)
- calcaneus length (37)
- femur caput depth (37)
- humerus length from trochlea to ventral tubercle (37)
- humerus proximal breadth (37)
- femur diaphysis depth (36)
- femur distal depth (36)
- femur trochlea breadth (32)
- femur proximal depth (31)
- molar tooth 3 occlusal surface width (30)
- talus lateral length (30)
- upper molar tooth 3 occlusal surface length (30)
- upper molar tooth 3 occlusal surface width (30)
- femur length from caput to lateral condyle (28)
- femur length from greater trochanter to medial condyle (28)
- body length with tail (25)
- lower molar tooth 1 occlusal surface length (23)
- lower molar tooth 2 occlusal surface length (23)
- ulna depth across the process anaconaeus (23)
- ulna proximal articular breadth (23)
- upper molar tooth 1 occlusal surface length (22)
- olecranon depth (21)
- olecranon length (21)
- upper molar tooth 2 occlusal surface length (21)
- breadth of calcaneal body (18)
- calcaneus width (18)
- tibia lateral length (14)
- femur length from caput to medial condyle (5)
- radius distal width (3)
- radius length (3)
- radius proximal articular width (3)
- radius proximal width (3)
- radius width (3)
- body height (1)
- height (1)
Notes
The FuTRES data store contains data from member projects
Please refer to the following data usage and citation policies for each data source when using this data in your research.
# GEOME data sources
GEOME projects each have their own data policy. We have not yet implemented an automated script
to display individual project information, instead you may refer directly to GEOME and search for individual
projects under the GEOME team for particular data usage policies.
Website:https://geome-db.org/
Date of Last Refresh: 2021-02-01
# VertNet
Vertnet records appearing in GEOME have been extracted from Vertnet using a special processing script, further processed, and then ingested using fovt-data-pipeline processing code.
Website:http://vertnet.org/
Date of Last Refresh: 2021-02-01
Files
data.csv
Files
(1.2 GB)
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Additional details
Funding
- U.S. National Science Foundation
- Collaborative Research: ABI Innovation: FuTRES, an Ontology-Based Functional Trait Resource for Paleo- and Neo-biologists 1759821
References
- Balk, M. A. J. Deck, K, Emery, R. Walls, D, Reuter, R La France... R. Guralnick . [In Re-Review]. Best practices for aggregating and reporting individual traits. iScience.