Published July 28, 2022 | Version v1
Dataset Open

Molecular evidence for introgressive hybridization in New Zealand masked gulls

Authors/Creators

  • 1. University of Vigo
  • 2. Centre for Biodiversity and Conservation Biology, Royal Ontario Museum

Description

Genetic data and codes to reproduce the analyses from the manuscript :

Given, A. D., Mills, J. A., Momigliano, P., & Baker, A. J. (2022). Molecular evidence for introgressive hybridization in New Zealand masked gulls. Ibis. https://doi.org/10.1111/ibi.13117

The data and codes are  in  two zipped folders

  1. FSC.zip
  2. PopGen.zip

The FSC.zip folder contains data and scripts to reproduce the fastsimcoal simulations and to calculate summary statistics from observed and simulated data. It also includes the results from these analyses and an R script to run ABC model selection via random forest.  

The PopGen.zip folder contains the microsatellite dataset in both genepop (RB-BB.gen) and structure (RB-BB.str) formats , the results from STRUCTURE analyses (folder RB-BB_STRUCT), and an R script (Popgen_analyses.r) to reproduce population genetic analyses (PCA and summary statistics: FST, and estimate HWE,  HO and HE) and plots. 

Files

FSC.zip

Files (148.7 MB)

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md5:bb97771bb2a82bddbacedb1d4eec04b7
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Additional details

Related works

Is published in
Journal article: 10.1111/ibi.13117 (DOI)

Funding

Research Council of Finland
Evolutionary and conservation genomics of rapid ecological speciation in the Baltic Sea 316294