Dynamic deformation calculation of articular cartilage and cells using resonance-driven laser scanning microscopy - Osmotic Challenge and Validation Testing Dataset

This archive contains 3-D image stacks obtained over time of articular cartilage undergoing osmotic swelling. These were acquired with a resonance scanning protocol, which allows for fast scanning but with decreased image quality. The Python package, resonant_lsm, was developed to segment and analyze the deformation of cells in such images. The archive also contains validation testing data of this software. Included README files document the archive contents and how to reproduce the analyses.