CeNGEN Integrated mRNA data and bulk noncoding RNA lookup table
Creators
- 1. Yale University School of Medicine
- 2. Columbia University
- 3. Vanderbilt University School of Medicine
- 4. University of Massachusetts Chan Medical School
- 5. University of Alabama Birmingham
Description
This CeNGEN web tool provides a user interface to datasets described in Barrett et al(1): http://bulk.cengen.org:3838/Bulk_Integrated_viz/. It can also be run as an Rshiny app locally using the attached files.
Raw data are being processed at GEO, and this resource will be updated with the accession number when available.
(1)Integrating bulk and single cell RNA-seq refines transcriptomic profiles of specific C. elegans neurons. Alec Barrett, Erdem Varol, Alexis Weinreb, Seth R. Taylor, Rebecca McWhirter, CyrilCros, Manasa Basavaraju, Abigail Poff, John A. Tipps, Maryam Majeed, Berta Vidal, Chen Wang, Eviatar Yemini, Emily A. Bayer, HaoSheng Sun, Oliver Hobert, David M.Miller III, Marc Hammarlund. bioRxiv 2022.04.05.487209; doi: https://doi.org/10.1101/2022.04.05.487209
Files
Long_form_tables_forAlexis.zip
Files
(73.7 MB)
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