Published April 7, 2022 | Version 1.0

Paulinella micropore KR01 manually corrected gene models from selected KEGG pathways

Authors/Creators

  • 1. Rutgers University

Description

Major results files produced from the analysis of the nucleotide biosynthesis, DNA replication, and histidine metabolism pathways in Paulinella micropore KR01.

 

manually_corrected_genes.genome.gff3.gz

Gene models (in GFF3 format) of manually corrected P. micropora KR01 genes.

 

manually_corrected_genes.cds.fna.gz

CDS of manually corrected P. micropora KR01 genes.

 

manually_corrected_genes.pep.faa.gz

Protein sequences of manually corrected P. micropora KR01 genes.

 

fasta.tar.gz

Sequences used for phylogenetic analysis of major KEGG Orthologs from the nucleotide biosynthesis, DNA replication, and histidine metabolism pathways.

 

aln.tar.gz

Alignments produced by mafft v7.453 (‘--localpair --maxiterate 1000’) that were used for phylogenetic analysis of the major KEGG Orthologs.

 

tree.tar.gz

Consensus trees produced by iqtree v1.6.12 (‘-m LG+R7 -bb 2000 -quiet’) that were used for phylogenetic analysis of the major KEGG Orthologs.

Files

Files (8.0 MB)

Name Size Download all
md5:a6b79a9b5afabe273416880ece6ffa16
4.4 MB Download
md5:4a6da10a87975878a5738212da9063cc
3.0 MB Download
md5:ddd2a917052af0fcf0e3fd9f64e111af
86.4 kB Download
md5:def6f88ba2b9b8af7c7abe9c7e55cfaa
73.8 kB Download
md5:274ce7bbaf0349ca17e505b3289c59ae
60.4 kB Download
md5:e4f9b9cccd3eb81112a92ecade43b816
408.6 kB Download