Published July 27, 2022 | Version Version 1

Copper binding leads to increased dynamics in the regulatory N-terminal domain of full-length human copper transporter ATP7B

  • 1. Umeå University Department of Chemistry
  • 2. University of Copenhagen Department of Biomedical Sciences
  • 3. Lund University Department of Experimental Medical Science

Description

Dataset from article "Copper binding leads to increased dynamics in the regulatory N-terminal domain of full-length human copper transporter ATP7B"

Contains simulation input files and reduced trajectories. 

The files are sorted into four folders: reA_apo, reA_holo, reB_apo, reB_holo. Each folder contains the following (types of) files:

Topology file:                                           topol.top
Index file:                                                 index.ndx
Production mdp files for each replica:     production_rep{i}.mdp
Starting structures as .gro files:              ATP7B_E2_re{A/B}_{apo/holo}_rep{i}_start.gro
10 ns step trajectories in .xtc format:      ATP7B_E2_re{A/B}_{apo/holo}_rep{i}_trajectory.xtc
Folder with equilibration restraints:         restraints
Folder with topology and forcefield:        toppar

Files

reA_apo.zip

Files (1.7 GB)

Name Size
md5:ad68c6a2aff05cf8a51ead8d51e759bc
413.5 MB Preview Download
md5:2366f943e6c9b9126ea16c7f40513ce1
413.6 MB Preview Download
md5:292ff4101c3eb72754fd4abfe24a1fe8
414.3 MB Preview Download
md5:b0145b7d4b1ce5b1672dca7abc4d8ad5
414.3 MB Preview Download