MD simulation of POPC bilayer with OPLS3e force field, 100 mM NaCl part 2
Authors/Creators
Description
MD simulation of POPC bilayer with OPLS3e force field, 100 mM NaCl part 2 (500-1000ns)
Dataset contains trajectories (_trj) for the last 500ns of the 1000ns trajectory, topology (-out.cms), and other files
For the ease of the upload, trajectory files (_trj) are divided to 100ns pieces and tarred (named desmond_md_nacl100_x-xns.tar.gz)
Dataset also contains Gromacs converted trajectory (.xtc) for the last 500 ns of 1000 ns trajectory
System: POPC bilayer in water
Number of lipids: 200 (100/leaflet)
Number of waters: 8880
Concentration: 100 mM
Number of cations: 16
Simulation time: 1000 ns (in this dataset 500-1000ns)
Simulation engine: Desmond 2019-4
Temperature: 300 K
Related dataset: MD simulation of POPC bilayer with OPLS3e force field, 100 mM NaCl part 1
Files
Files
(39.7 GB)
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md5:a820f11e159c68102c918929c6b55d20
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md5:a3ffeedacffa9fd19dddcd8d7a244d07
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md5:31ae9860bf914818948d59ab0cae8675
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15.5 MB | Download |
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md5:6cc798a58472ffa35eec3c25008ae56e
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23.3 MB | Download |
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md5:e5cd560632b86db4fe00b8a687c86452
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68.3 MB | Download |
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md5:0c3f3611265bbcd09531a5abcef3ea13
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5.9 GB | Download |
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md5:ec5b524afe17117981365cbc6d6058af
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5.9 GB | Download |
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md5:08b41b17cd43dd1b4512d4678854bf97
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5.9 GB | Download |
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md5:59e1ef7aba10a4ca84c5d5f38808bc31
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5.9 GB | Download |
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md5:70c79ed16a688162e3beae20de1fde31
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15.5 MB | Download |
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md5:25d3a0f25638497cecc40a0b96a19711
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5.9 GB | Download |
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md5:d56a9dd704c447c82fca2beea8359d7a
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10.0 GB | Download |
Additional details
Related works
- Compiles
- Preprint: 10.26434/chemrxiv-2022-m89bg (DOI)