Published March 16, 2022
| Version 1.0
Dataset
Open
PBMC CITE-seq, 10x Multiome, and TEA-seq multiomic datasets from Swanson, et al. eLife (2021).
Authors/Creators
- 1. Allen Institute for Immunology
- 2. University of Washington
Description
Assembled multiomic datasets from Swanson, et al. Simultaneous trimodal single-cell measurement of transcripts, epitopes, and chromatin accessibility using TEA-seq. eLife 2021;10:e63632 DOI: 10.7554/eLife.63632
Datasets were assembled from the GEO repository: GSE158013
Data are provided as SeuratObjects stored in separate .rds files using the saveRDS() function in R.
MuData files for use with Python tools (muon, scanpy, scvitools, et al.) will be added soon.
Contact Lucas Graybuck (lucasg at alleninstitute dot org) if there are problems with these datasets.
Files
sample_characteristics.csv
Files
(2.2 GB)
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md5:bbba93fe3df5e4c1eae70931b9c1da7a
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270.8 MB | Download |
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1.6 kB | Preview Download |
Additional details
References
- Swanson, Elliott, et al. eLife 2021;10:e63632. DOI: 10.7554/eLife.63632