Software Open Access
hippunfold Experiments
Jordan DeKraker; Roy AM Haast; Mohamed D Yousif; Bradley Karat; Stefan Köhler; Ali R Khan
Experiments run to test HippUnfold and similar software packages (FS7 and ASHS) on extant opensource datasets. `datasets/` folder will be uploaded separately as it is very large in size (1.8TB). In the meantime, the plotting component of every script can be run using the included .mat saved data.
Corresponding paper:
HippUnfold: Automated hippocampal unfolding, morphometry, and subfield segmentation
Jordan DeKraker, Roy AM Haast, Mohamed D Yousif, Bradley Karat, Stefan Köhler, Ali R Khan
doi: https://doi.org/10.1101/2021.12.03.471134
Files
(206.6 MB)
| Name | Size | |
|---|---|---|
|
Berron_unfoldedManualSubfields.m
md5:5b588d1a187c84c0951aa049cb418af7 |
5.1 kB | Download |
|
Berron_unfoldedManualSubfields.mat
md5:1833a456346a0c2ae22e201dcc9768f4 |
962.8 kB | Download |
|
Berron_unfoldedManualSubfields_corobl.m
md5:d904656a7f9abf678c854522053856a9 |
5.3 kB | Download |
|
datasets-list.txt
md5:6d6813a21da5e01ef0c62ecb7c492ccf |
455 Bytes | Download |
|
dependencies.tar.gz
md5:bdbef4d4122d855304c4be9640366dca |
661.7 kB | Download |
|
figures.tar.gz
md5:5db20efee47ab75b42862015c8577198 |
2.6 MB | Download |
|
flatmaps.tar.gz
md5:479e491f574d91ae74e9ea6a3bd6e3ca |
8.4 MB | Download |
|
FS_unfoldedSubfields.m
md5:cdee4a9b087c8379da8e291ad4418f42 |
5.8 kB | Download |
|
FS_unfoldedSubfields.mat
md5:d7f3edaf3f0a9ea05acfa46199aa6bf7 |
1.7 MB | Download |
|
HCA100.m
md5:bf87259c8e2cbbe50384ccfda257c7c8 |
3.8 kB | Download |
|
HCA100.mat
md5:b23fb3b3762cd562b6a4af2e44338fc9 |
461.3 kB | Download |
|
README.txt
md5:98a9a66a62bd992f274bd7004ba199c2 |
1.0 kB | Download |
|
snapshots.tar.gz
md5:97f419f4500ba02e76d2959836e7206e |
6.1 MB | Download |
|
testSet_flatmaps.m
md5:9b2fd4af842f4d5d11cf55e2483a600f |
4.3 kB | Download |
|
testSet_flatmaps.mat
md5:c551dd4e46fd92f151cc9dff7abc78c3 |
185.3 MB | Download |
|
testSetDice.m
md5:77e489c3f123b6f032dfbb410f0aed9a |
4.3 kB | Download |
|
testSetDice.mat
md5:1c641468068f682ee10d33c45fa30192 |
254.8 kB | Download |
|
verify_integrity_generalizationData.m
md5:32f9a601cdb8de64105675eab0344e8e |
3.8 kB | Download |
|
verify_integrity_generalizationData.mat
md5:fb3bcb516f52d2e116d0640ab69f83d7 |
155.4 kB | Download |
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downloads
| Views | 92 |
| Downloads | 89 |
| Data volume | 1.1 GB |
| Unique views | 73 |
| Unique downloads | 41 |
Indexed in
- Publication date:
- March 15, 2022
- DOI:
-
- License (for files):
- Creative Commons Attribution 4.0 International