Published March 13, 2022 | Version v1

MD simulation of POPC bilayer with OPLS3e force field, 200 mM CaCl2 part 2

Authors/Creators

Description

MD simulation of POPC bilayer with OPLS3e force field, 200 mM CaCl2 part 2 (500-1000ns)

Dataset contains trajectories (_trj) for the last 500ns of the 1000ns trajectory, topology (-out.cms), and other files

For the ease of the upload, trajectory files (_trj) are divided to 100ns pieces and tarred (named desmond_md_cacl200_x-xns.tar.gz)

System: POPC bilayer in water

Number of lipids: 200 (100/leaflet)

Number of waters: 8880

Salt: CaCl2

Concentration: 200 mM

Number of cations: 32

Simulation time: 1000 ns (in this dataset 500-1000ns)

Simulation engine: Desmond 2019-4

Temperature: 300 K

Related dataset: MD simulation of POPC bilayer with OPLS3e force field, 200 mM CaCl2 part 1

Files

Files (29.7 GB)

Name Size
md5:87c1b453568628873829921fbe98835b
8.1 kB Download
md5:4f188a4aa544ceade79f530187adbc0f
15.5 MB Download
md5:3a151149f486cf6845e64e99fe3b27fa
23.3 MB Download
md5:24f56e5a63504b4911149470e9983161
68.3 MB Download
md5:3d651effc3108b1b0ef4ceb5c16a79f1
5.9 GB Download
md5:4787dbb61b42b6fa6e79cc488a0823d5
5.9 GB Download
md5:8565db44a160410f0dc53fb775636cc9
5.9 GB Download
md5:9d999b5692980c0888ef2178806a2765
5.9 GB Download
md5:e360c1fd9ac61d9ca09cc1183723bdec
15.5 MB Download
md5:bbd0db9992827f1b3914d1914e872d76
5.9 GB Download

Additional details

Related works

Compiles
Preprint: 10.26434/chemrxiv-2022-m89bg (DOI)