Published March 11, 2022
| Version v1
Dataset
Open
MD simulation of POPC bilayer with OPLS3e force field, 100 mM CaCl2 part 2
Authors/Creators
Description
MD simulation of POPC bilayer with OPLS3e force field, 100 mM CaCl2 part 2 (500-1000ns)
Dataset contains trajectories (_trj) for the last 500ns of the 1000ns trajectory, topology (-out.cms) and other files.
For the ease of the upload, trajectory files (_trj) are divided to 100ns pieces and tarred (named desmond_md_cacl100_x-xns.tar.gz)
System: POPC bilayer in water
Number of lipids: 200 (100/leaflet)
Number of waters: 8880
Salt: CaCl2
Concentration: 100 mM
Number of cations: 16
Simulation time: 1000 ns (in this dataset 500-1000ns)
Simulation engine: Desmond 2019-4
Temperature: 300 K
Related dataset: MD simulation of POPC bilayer with OPLS3e force field, 100 mM CaCl2 part 1
Files
Files
(29.7 GB)
| Name | Size | |
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md5:cf6d0d261b3057b915dc8dae6ba445a6
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8.1 kB | Download |
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md5:908074d439839a3455fbb40a5a914ff2
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15.5 MB | Download |
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md5:3c1250c6d5d199ba3e42a2d482da86dd
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23.3 MB | Download |
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md5:f82379d86bb4c6158122e0b96620a52f
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68.3 MB | Download |
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md5:49500cd7c5ce88b8e7aabdd253950a11
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5.9 GB | Download |
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md5:91348aabc45088b4f6d17225d651fddf
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5.9 GB | Download |
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md5:173b7906d12089b52195b3d4169de13a
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5.9 GB | Download |
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md5:6ee6c101a75f2a26f9064f35b1b4ab02
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5.9 GB | Download |
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md5:8f87673cce2e84425d061f71162f7baf
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15.5 MB | Download |
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md5:c39a9397f642098d0f59f7f3729d17d9
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5.9 GB | Download |
Additional details
Related works
- Compiles
- Preprint: 10.26434/chemrxiv-2022-m89bg (DOI)