Published March 11, 2022
| Version v1
Dataset
Open
MD simulation of POPC bilayer with OPLS3e force field, 50 mM CaCl2 part 2
Authors/Creators
Description
MD simulation of POPC bilayer with OPLS3e force field, 50 mM CaCl2 part 2 (500-1000ns)
Dataset contains trajectories (_trj) for the last 500ns of the 1000ns trajectory, topology (-out.cms), and other files.
For the ease of the upload, trajectory files (_trj) are divided to 100ns pieces and tarred (named desmond_md_cacl50_x-xns.tar.gz)
System: POPC bilayer in water
Number of lipids: 200 (100/leaflet)
Number of waters: 8880
Salt: CaCl2
Concentration: 50 mM
Number of cations: 8
Simulation time: 1000 ns (in this dataset 500-1000ns)
Simulation engine: Desmond 2019-4
Temperature: 300 K
Related dataset: MD simulation of POPC bilayer with OPLS3e force field, 50 mM CaCl2 part 1
Files
Files
(29.7 GB)
| Name | Size | |
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md5:026e6afa39e33f6e16812eb2f37e9e8d
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8.1 kB | Download |
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md5:f5543f5f1d68c5a562a138f8e6afaae3
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15.5 MB | Download |
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md5:99d0508175cc4d97dc75af327fabc188
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23.3 MB | Download |
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md5:df3556fc490e9b205d7fb0d0230e33bc
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68.3 MB | Download |
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md5:92140f7d665152a0938d3cf80bd388dd
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5.9 GB | Download |
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md5:d55866e177bfeac963d8d111ad21fbc9
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5.9 GB | Download |
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md5:1f8b1464ff89be445b18a292d58ee40f
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5.9 GB | Download |
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md5:f9783ac6fab48161bab7a0fd91e8f6fd
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5.9 GB | Download |
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md5:c8d8ab24cf240f4da486de0b1c53835d
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15.5 MB | Download |
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md5:c8d6b933064c2581e008a072497c8bd6
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5.9 GB | Download |
Additional details
Related works
- Compiles
- Preprint: 10.26434/chemrxiv-2022-m89bg (DOI)