Published March 7, 2022 | Version v1

MD simulation of POPC bilayer with CHARMM36 force field. 5 w/l.

Authors/Creators

Description

MD simulation of POPC (1-palmitoyl-2-oleoyl-phosphatidylcholine) bilayer with CHARMM36 force field. 5 w/l.

Dataset contains simulation files including trajectories (.xtc) (original production.xtc and equilibrated and centered centered-350-1000ns.xtc).

System: POPC bilayer in water

Number of lipids: 200 (100/leaflet)

Number of waters: 1000

Simulation time: 1000 ns

Sampling rate: 10 ps

Simulation engine: GROMACS 2019.5

Temperature: 300 K

Files

Files (19.4 GB)

Name Size
md5:34bacf46630f419a2081b9532ae1793c
7.2 GB Download
md5:6943cdf3ae3c7b5a3a99c9e54d4a9b6e
24.0 kB Download
md5:441ade57746cc3fd828e465b89f467b1
38.6 kB Download
md5:8da0d741746c182e465f5b5db4d6bf45
312.0 MB Download
md5:8ce1d38d3462092893f75f0f5d881db9
2.1 MB Download
md5:828bb448ed311bfb64282eff55c2d87d
759.3 kB Download
md5:9da38e92c675ca072769bc0a6b503284
716.0 MB Download
md5:b3decb2afbcc7225cdf88b98fcc24ca4
11.2 GB Download
md5:c6d9e708d0b3d06eb010f4cfedab9a55
1.2 kB Download
md5:e163a90c2d069565f80d1c2b4857d4ce
648 Bytes Download
md5:8baea33da62e4af081a089e6749f269f
364 Bytes Download

Additional details

Related works

Compiles
Preprint: 10.26434/chemrxiv-2022-m89bg (DOI)