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Published March 3, 2022 | Version v1
Dataset Open

Immune repertoires of de-identified TCGA tumor samples assembled by TRUST4

Authors/Creators

  • 1. Dana-Farber Cancer Institute
  • 2. GV20
  • 3. University of Texas Southwestern Medical Center

Description

We applied TRUST4 to assemble the immune repertoire data from TCGA tumor samples. Because TCGA has restricted access permission, the sample IDs are de-identified and the sequence is at the amino acid level. The data is used in the study of "Comprehensive characterizations of immune receptor repertoire in tumors and cancer immunotherapy studies".  The format is:

CancerType_RandomID Chain_Type CDR3_AminoAcid ConstantGene Abundance

Files

Files (826.1 MB)

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md5:ddf25ef1565436ed08911dfe354a0eb0
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