Published January 25, 2012 | Version v1
Working paper Open

Parallel Mesh Generation, Migration and Partitioning for the Elmer Application

  • 1. Dept. of Computer Engineering, Bogazici University, Istanbul, Turkey

Description

The main goal of this project is to develop a parallel tetrahedral mesh generator based on existing sequential mesh generation software. As sequential mesh generation software, the Netgen mesh generator was used due to its availability as LGPL open source software and its wide user base. Parallel mesh generation routines were developed using the MPI libraries and the C++ language. The parallel mesh generation algorithms developed proceed by decomposing the whole geometry into a number of sub-geometries sequentially on a master node at the beginning and then mesh each sub-geometry in parallel on multiple processors. Three methods were implemented. The first decomposes the CAD geometry and produces conforming surface sub-meshes that are sent to other processors for volume mesh generation. The second and third methods are refinement based methods that also make use of the CAD geometry information. Advantages and disadvantages of each method are discussed. Parallel repartitioning also need to be done in the first method. To facilitate distributed element movements in parallel, a migration algorithm that utilizes "owner updates" rule is developed. Timing results obtained on the Curie supercomputer are presented. In particular, results show that by using a refinement based method, one can generate over a billion element meshes in under a minute.

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Additional details

Funding

European Commission
PRACE-1IP - PRACE - First Implementation Phase Project 261557