There is a newer version of the record available.

Published June 25, 2021 | Version 1.1.0

Dataset for demonstration of quantitative label-free imaging with phase and polarization

  • 1. Chan Zuckerberg Biohub

Description

The QLIPP_Reconstruction_Resources_20x.zip  file contains raw images of mouse brain slice and anisotropic glass target acquired with QLIPP. The file also contains the configuration files to reconstruct the phase, retardance, and orientation from this data with the recOrder pipeline. The tutorial slides for using this dataset for reconstruction can be found here (10.5281/zenodo.5135889).

 

The other two zip files are a subset of above used for automated testing of recOrder and waveOrder repositories.

Files

QLIPP_Reconstruction_Resources_20x.zip

Files (1.8 GB)

Name Size
md5:6ae24ddab3e6a62d35b8a20bc6e372c0
968.3 MB Preview Download
md5:18b65071826f5efd9efe24cc53d3790f
814.2 MB Preview Download
md5:fef7224e73dae9d68c7312b3508dca53
25.4 MB Preview Download

Additional details

Related works

Cites
Presentation: 10.5281/zenodo.5135889 (DOI)
Is referenced by
Software: https://github.com/mehta-lab/recOrder (URL)
Software: https://github.com/mehta-lab/waveOrder (URL)
Is supplement to
Journal article: 10.7554/eLife.55502 (DOI)