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Published February 20, 2022 | Version v1
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Gut microbiome disturbances of altricial Blue and Great tit nestlings are countered by continuous microbial inoculations from parental microbiomes

  • 1. Institute of Entomology, Biology Centre of the Czech Academy of Sciences
  • 2. Natural History Museum of Denmark, University of Copenhagen
  • 3. Section for Ecology and Evolution, Department of Biology, University of Copenhagen
  • 4. Institute of Entomology, Biology Centre of the Czech Academy of Sciences and Faculty of Science, University of South Bohemia

Description

Complete ASV tables from two different experiments included in the the manuscript: "Gut microbiome disturbances of altricial Blue and Great tit nestlings are countered by continuous microbial inoculations from parental microbiomes".

ASV - Efficacy experiment: Complete ASV table of the laboratory (efficacy) experiment. We collected cloacal swabs from 10 adult Great tits (Parus major). Avian gut microbiome together with microbiomes of water and food samples are included. The Genbank accession numbers of the samples are given in each column (Bioproject: PRJNA800611).

ASV - Field experiment: Complete ASV table of the field experiment. We collected cloacal swabs from parents and chicks in ten nests of Great tits and ten nests of Blue tis (Cyanistes caeruleus) together with nest and water microbiome. The Genbank accession numbers of the samples are given in each column (Bioproject: PRJNA800248)

Notes

Additional funding acknowledgment: KAJ is grateful for the financial support received from the Villum Foundation (Young Investigator Programme, project no. 15560) and the Carlsberg Foundation (Distinguished Associate Professor Fellowship no. CF17-0248)

Files

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Additional details

Funding

BABE – Why is the world green: testing top-down control of plant-herbivore food webs by experiments with birds, bats and ants 805189
European Commission