Published December 17, 2014
| Version v2
Dataset
Open
MD simulation trajectory and related files for POPC/cholesterol (7 mol%) bilayer (Berger model delivered by Tieleman, modified Höltje, Gromacs 4.5)
Authors/Creators
- 1. Aalto University
- 2. Lund University
Description
Equilibrated POPC lipid bilayer simulation ran with Gromacs 4.5, Berger force field delivered by Peter Tieleman (http://wcm.ucalgary.ca/tieleman/downloads), Modified Höltje model for cholesterol (http://dx.doi.org/10.1016/S0005-2736(01)00270-X), 50ns, T=298K, 120 POPC molecules, 7290 water molecules, 8 cholesterol molecules. This data is used in http://dx.doi.org/10.1039/C2CP42738A and in the nmrlipids.blospot.fi project. More details from nmrlipids.blospot.fi. If data is used, please cite [Ferreira et al. Phys. Chem. Chem. Phys., 2013,15, 1976-1989], the nmrlipids.blogspot.fi project and the original publication related to the force field.
Files
Files
(6.8 GB)
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md5:51a4733198e5213f9434b6071a06b79a
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11.3 kB | Download |
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md5:e2d6dd47ba5ae0f64231b41554e1e927
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1.4 kB | Download |
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md5:41dd0a2a359e7c27ba677956db9550ef
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214 Bytes | Download |
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md5:7b8c2425e12d82307bb04315868c571c
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2.0 MB | Download |
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md5:b7a48fdf08f91eeb6c456809447c2d1e
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1.3 kB | Download |
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md5:015d3f125c967cfbcba116f8181fe436
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169 Bytes | Download |
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md5:2a3eff21d55ec23e73180f1e3b42b05a
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30.8 kB | Download |
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md5:1247c0fd3eee68ff169c9d3a444edfca
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62.1 kB | Download |
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md5:c18349ffd02b3cfef95ea499e08ac0fd
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34.3 kB | Download |
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md5:627538fad04631af78eeb042be52ff71
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14.4 kB | Download |
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md5:90a6f757c590ad6be420a998d02b14ed
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930.1 kB | Download |
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md5:24bdd7d4d78f6ebf0c25ddcde718abee
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1.7 GB | Download |
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md5:7fcefb7bded1fd54b78c752e88caf8ee
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1.7 GB | Download |
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md5:90e4143e78de7164fc5db63333ca15f1
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3.4 GB | Download |
Additional details
References
- nmrlipids.blogspot.fi
- Ferreira et al. Phys. Chem. Chem. Phys., 2013,15, 1976-1989