High-throughput measurement and mapping of individual replication fork velocities by nanopore sequencing
Description
These data are related to the "High-throughput measurement and mapping of individual replication fork velocities by nanopore sequencing" manuscript by Theulot, Lacroix et al. and to the GitHub repository NanoForkSpeed (https://github.com/LacroixLaurent/NanoForkSpeed).
BT1_run4.tar.gz contains the nanopore reads from a typical experiment as fast5 files.
BT1_run4_mega.zip contains the result of the BrdU basecalling as described on the GitHub page in a modified bam file format as described on the GitHub page NanoForkSpeed/BrdU_Basecalling..
BT1_run4_Megalodon_00_smdata.rds contains the result of the parsing function for the modified bam file as described on the GitHub page NanoForkSpeed/BrdU_Basecalling.
BT1_run4_Megalodon_00_NFS_data.rds contains the result of the fork detection procedure on the BT1_run4_Megalodon_00_smdata.rds file as described on the GitHub page NanoForkSpeed/Forks_Detection.
BT1_run4_merged_NFS_data.rds contains the result of the NFS_merge function as described on the GitHub page NanoForkSpeed/Forks_Detection.
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