Published January 26, 2022
| Version v1
Dataset
Open
RNAseq sequences of the study "Transactive response DNA-binding Protein (TARDBP/TDP-43) regulates early HIV-1 entry and infection" (2/2)
Authors/Creators
- Cabrera-Rodríguez, Romina1
- Pérez-Yanes, Silvia1
- Montelongo, Rafaela2
- Lorenzo-Salazar, José-Miguel2
- Estévez-Herrera, Judith1
- García-Luis, Jonay1
- Íñigo-Campos, Antonio2
- Rubio-Rodríguez, Luis A.2
- Muñoz-Barrera, Adrián2
- Trujillo-González, Rodrigo3
- Dorta-Guerra, Roberto4
- Casado, Concha5
- Pernas, María5
- Blanco, Julià6
- Flores, Carlos7
- Valenzuela-Fernández, Agustín1
- 1. Laboratorio de Inmunología Celular y Viral, Unidad de Farmacología, Sección de Medicina, Facultad de Medicina, Universidad de La Laguna (ULL), La Laguna, Tenerife, Spain
- 2. Genomics Division, Instituto Tecnológico y de Energías Renovables, 38600 Santa Cruz de Tenerife, Spain
- 3. Laboratorio de Inmunología Celular y Viral, Unidad de Farmacología, Sección de Medicina, Facultad de Medicina, Universidad de La Laguna (ULL), La Laguna, Tenerife, Spain; Analysis Department, Faculty of Mathematics, Universidad de La Laguna (ULL), La Laguna, Tenerife, Spain
- 4. Mathematics, Statistics and Operations Research, Faculty of Mathematics, Universidad de La Laguna (ULL), La Laguna, Tenerife, Spain
- 5. Unidad de Virología Molecular. LRIR. Centro Nacional de Microbiología (CNM), Instituto de Salud Carlos III, Madrid, Spain
- 6. AIDS Research Institute IrsiCaixa, Institut de Recerca en Ciències de la Salut Germans Trias i Pujol (IGTP), Badalona, Barcelona, Catalonia, Spain; Universitat de Vic-Central de Catalunya, UVIC-UCC, Vic, Catalonia, Spain
- 7. Genomics Division, Instituto Tecnológico y de Energías Renovables, 38600 Santa Cruz de Tenerife, Spain; Research Unit, Hospital Universitario N. S. de Candelaria, 38010 Santa Cruz de Tenerife, Spain; CIBER de Enfermedades Respiratorias, Instituto de Salud Carlos III, 28029 Madrid, Spain; Instituto de Tecnologías Biomédicas (ITB) Universidad de La Laguna, 38200 San Cristóbal de La Laguna, Spain
Description
Each pair of FASTQ files corresponds to a specific sample condition:
| Condition | Sample | FASTQ name R1 | FASTQ name R2 |
|---|---|---|---|
| TDP-43 siRNA D | RNASEQ-AVF9 | RNASEQ-AVF9_S1_R1_001.fastq.gz | RNASEQ-AVF9_S1_R2_001.fastq.gz |
| Cneg | RNASEQ-AVF10 | RNASEQ-AVF10_S2_R1_001.fastq.gz | RNASEQ-AVF10_S2_R2_001.fastq.gz |
| Flag-wt-TDP-43 | RNASEQ-AVF11 | RNASEQ-AVF11_S3_R1_001.fastq.gz | RNASEQ-AVF11_S3_R2_001.fastq.gz |
| Flag-NLS-mut-TDP-43 | RNASEQ-AVF12 | RNASEQ-AVF12_S4_R1_001.fastq.gz | RNASEQ-AVF12_S4_R2_001.fastq.gz |
| Cneg | RNASEQ-AVF13 | RNASEQ-AVF13_S5_R1_001.fastq.gz | RNASEQ-AVF13_S5_R2_001.fastq.gz |
| Scramble | RNASEQ-AVF14 | RNASEQ-AVF14_S6_R1_001.fastq.gz | RNASEQ-AVF14_S6_R2_001.fastq.gz |
| Oligos B+C | RNASEQ-AVF15 | RNASEQ-AVF15_S7_R1_001.fastq.gz | RNASEQ-AVF15_S7_R2_001.fastq.gz |
| Oligos A+B+C | RNASEQ-AVF16 | RNASEQ-AVF16_S8_R1_001.fastq.gz | RNASEQ-AVF16_S8_R2_001.fastq.gz |
Files
Files
(36.7 GB)
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md5:eefa13a38e79b9f02289a89cac0b8a0b
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md5:cacf1a6388c79c43ff11818c1700b8d1
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md5:412a0f1bcd512f20283a8ee5a53faff8
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md5:76878e0792898f1ed8244adc00aa0be9
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md5:24e566be0e8662f8eb077c366ae342d8
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md5:12d66aa491a37445472bf6cfa6f1177c
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2.4 GB | Download |
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1.8 GB | Download |
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md5:8dbe067d2400ea32d8b4b48d872d60c9
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1.8 GB | Download |
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md5:dea40b8bd3f9f1f4290dc90fef1b8f02
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2.2 GB | Download |
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md5:a07524278d7134c5908c9e934a3b307f
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2.2 GB | Download |