Summary of sequence variations in strains of Sars-CoV-2

This entry collects JSON files specifying sequence variations of different strains (aka variants) of SARS-CoV-2 based on data retrieved from outbreak.info and/or covariants.org. These JSON files are formatted to match the Feature API of aquaria.ws.  File names match the linage names of VOCs and VOIs. In the case of omicron we have added a version (omicron_charge) that highlights charge changing residues in magenta, as well as an extra file (omicron_BA2) for the BA.2/21K sister clade and a file (omicron_BA1_BA2_diff) highlighting the differences between the lineages (coloring variations in only BA.1 red, only BA.2 blue, in both magenta). CovidVariants.pdf lists SARS-CoV-2 proteins together with links that show how to map variations onto the structures.