Published July 24, 2016 | Version v1

Greengenes May 2013 unmasked 16S rRNA alignments

Authors/Creators

  • 1. Australian National University

Description

These data are derived from the raw PyNast aligned 16S rRNA files from Greengenes. The Jupyter (Python 3) notebook used and the original data (provided by Greg Caporaso) are also included.

Notes

The notebook uses a local copy of the Greengenes release to establish the sequence IDs for each file.

Files

generate_sample_data.ipynb

Files (824.6 MB)

Name Size
md5:eff49415a88c894b6da6b7d4b59a17cd
5.2 kB Download
md5:1b1debeda4f245da5c4f96f84db2946b
7.7 kB Download
md5:20b3d0babef5ba5f100e4d76b4a9424f
11.5 kB Download
md5:e3af8024704142f493aff6494d0c043d
46.2 kB Download
md5:0cdaa3458e65a810d6a2ae777dd610ce
129.9 kB Download
md5:24b9de4a0b1ebd2f57cadb7dadd0611b
302.6 kB Download
md5:efa645297895210a7f3bd5e6c1f5e771
687.3 kB Download
md5:95a3eefb281a96b880991a726a5c12e0
1.5 MB Download
md5:d5a07deb5a03902cf5e35546ef0c6590
3.1 MB Download
md5:51185b87dc0eb6ad50c5a48bb3b78e1e
6.3 MB Download
md5:ea3d6672df7c9a7af8dbfe6662b39cb2
13.0 MB Download
md5:e75a462d5925342920b523c399b5226a
26.5 MB Download
md5:c3ee6865cc33ca6ecfae6914a85387ba
55.3 MB Download
md5:39a53445b182a9cd8f6686577042efaf
109.8 MB Download
md5:789bed9b35520b1cbc843ce0a7fe8040
3.9 kB Preview Download
md5:24720085027c35132de0588fee518065
608.0 MB Download