Published January 3, 2022
| Version v1
Dataset
Open
Annotation of the the assembled genome of Fusarium oxysporum f. sp. albedinis strain 133, the causal agent of date palm dieback.
Creators
- 1. Plant Pathology Program, Agrobiosciences, University Mohammed VI Polytechnic (UM6P), Ben Guerir, Morocco
- 2. Institute of Bioinformatics and Systems Biology, Justus Liebig University, Giessen, Germany
Description
Annotation of the the assembled genome of Fusarium oxysporum f. sp. albedinis strain 133 (Khayi et al., 2020). Gene prediction and annotation were carried out using funnotate pipeline v1.8.1 (Stajich, 2020), which includes masking, ab initio gene-prediction training, using Augustus and Genmark, with the EST dataset reported to the Ganoderma mycocosm repository, gene prediction, and the assignment of functional annotation to protein-coding gene models.
Files
F_Oxysporum_Foa_133.annotations.txt
Files
(33.5 MB)
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Additional details
Related works
- Is supplement to
- Journal article: 10.1101/2021.11.18.469146 (DOI)