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Published December 15, 2021 | Version v2.1.1
Software Open

MIT-LCP/mimic-code: MIMIC Code v2.1.1

Authors/Creators

  • 1. @mit-lcp
  • 2. MIT
  • 3. WHU
  • 4. Wenzhou Medical University
  • 5. @honestbee @fundMyLife @airasia
  • 6. @MIT-LCP
  • 7. MIT CSAIL
  • 8. HUP
  • 9. National University Of Singapore
  • 10. https://haobibo.cn
  • 11. Sensyne Health / Institute of Biomedical Engineering, University of Oxford
  • 12. Hogeschool Utrecht

Description

This is a bug fix release to ensure concepts are created correctly.

Change log:

  • Rather than redirect the GitHub action output to /dev/null, the make concept query now uses bq query --quiet. This makes it easier to see where the script fails in the case of an error.
  • Fix syntax bugs in the norepinephrine / norepinephrine_equivalent_dose / ventilation queries
  • Various query changes are carried forward to postgresql scripts (vasoactive, ntprobnp, ventilation)
  • Use bg specimen in the severity score queries rather than specimen_pred

Full Changelog: https://github.com/MIT-LCP/mimic-code/compare/v2.1.0...v2.1.1

Files

MIT-LCP/mimic-code-v2.1.1.zip

Files (7.0 MB)

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md5:a84a9513e190daa662251b0bf9e0a5fb
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Additional details

Related works

Is supplement to
https://github.com/MIT-LCP/mimic-code/tree/v2.1.1 (URL)