Published December 15, 2021
| Version v2.1.0
Software
Open
MIT-LCP/mimic-code: MIMIC Code v2.1.0
Authors/Creators
- Alistair Johnson1
- Tom Pollard2
- Jim Blundell
- Brian Gow
- erinhong
- Nicolas Paris
- shu98
- JackieMe3
- Kien Dang
- Angus Zhang4
- Eric Carlson
- Qinyu Zhao
- etheleon5
- Andrew Barros
- Lucas Bulgarelli6
- Hans0124SG
- Peter Szolovits7
- Sicheng Hao
- C. V. Cosgriff8
- Sravan R9
- Thomas M Ward
- Bibo Hao10
- Chen Xie
- emilyva
- Fernando Andreotti11
- Ishrar Hussain
- James Wiggins
- Josh Gieringer
- Nikhil Haas
- Thijs van den Berg12
- 1. @mit-lcp
- 2. MIT
- 3. WHU
- 4. Wenzhou Medical University
- 5. @honestbee @fundMyLife @airasia
- 6. @MIT-LCP
- 7. MIT CSAIL
- 8. HUP
- 9. National University Of Singapore
- 10. https://haobibo.cn
- 11. Sensyne Health / Institute of Biomedical Engineering, University of Oxford
- 12. Hogeschool Utrecht
Description
This release fixes blood gas and (postgres) vent/oxygen delivery queries, adds the ntprobnp column to the cardiac_marker concept, and improves aux scripts for generating concepts in MIMIC-III.
Change log:
- Allow extra options to be passed to psql calls with MIMIC-III by @juliangilbey in https://github.com/MIT-LCP/mimic-code/pull/1195
- A single table aggregating vasoactive agents is now available as
vasoactive_agent, see https://github.com/MIT-LCP/mimic-code/pull/1203 - Include BNP in cardiac markers concept by @pedrogemal in https://github.com/MIT-LCP/mimic-code/pull/1204
- Fixed first day blood gas queries to use the specimen data present in labevents rather than a no-longer existing probabilistic prediction of speciment, https://github.com/MIT-LCP/mimic-code/pull/1209
- Same PR as above, propagated previous vent/oxygen delivery changes to the postgres scripts and improved tests https://github.com/MIT-LCP/mimic-code/pull/1209
Full Changelog: https://github.com/MIT-LCP/mimic-code/compare/v2.0.0...v2.1.0
Files
MIT-LCP/mimic-code-v2.1.0.zip
Files
(7.0 MB)
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md5:3b416d75b89612d2102d39df92a98123
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Additional details
Related works
- Is supplement to
- https://github.com/MIT-LCP/mimic-code/tree/v2.1.0 (URL)