Published December 12, 2021 | Version v1

MicroED datasets of biotin collected on Titan Krios G4 operated at 300kV and Ceta-D camera

  • 1. Graduate School of Medicine, The University of Tokyo
  • 2. Department of Biological Sciences, Graduate School of Science, The University of Tokyo

Description

MicroED datasets of biotin microcrystals were collected using Titan Krios G4 (300 kV) with the CMOS camera Ceta-D. The stage was controlled using SerialEM and diffraction images were independently collected using Velox software. For this reason, only frames with constant rotation speed should be used for data processing.

Rotation step (continuous) was ~0.96°/frame and each dataset consisted of ~63 images (tilt range is +/-30°). The calibrated camera lengths using evaporated aluminum were 751.09 mm, 952.85 mm, and 1075.09 mm, corresponding to nominal lengths of 430 mm, 540 mm, and 610 mm, respectively. Biotin crystals belonged to space group P212121 with a~5.2, b~10.2, c~20.8 Å, and could be merged at ~0.6 Å resolution.

Collection conditions:

  • gun lens 5, spot 11, C2 aperture 20, beam size 1.5 μm, 0.033 e/Å2/sec

Note:

  • emd files (hdf5 format) were transparently compressed using h5repack -f SHUF -f GZIP=4 command to reduce file size.
  • EMD file can be processed with DIALS using this dxtbx format file.
  • Metadata (machine parameters, stage tilt angles etc.) is stored as json format in /Data/Image/*/Metadata in emd file. See here for details.
  • If you want to process data using DIALS, please see the processing note.

Files

files_list.txt

Files (124.2 GB)

Name Size
md5:fe589163850c70b7ef0e510d5de73020
197.2 kB Preview Download
md5:ab54c7c259ba1de5204d15316c94cbdb
11.1 GB Download
md5:af97c744db037e04e5b95d042fcfbc28
11.1 GB Download
md5:d0f3bbe08c254d673b358689b674b9f5
10.6 GB Download
md5:44c2dccd01e32ac73b905485c6457e5a
10.9 GB Download
md5:bb7d5267d860abca38717d8c540fac22
8.4 GB Download
md5:49a08b5ca1bfd8297bf047e5888f1c9b
10.9 GB Download
md5:e694ae3729c58097472700341361a36c
10.9 GB Download
md5:59182cbe9a80650422063b4a4126088b
11.1 GB Download
md5:259ba0a88700a9091e2fd4d2f66e850e
10.9 GB Download
md5:ac523b588783e8bf76e089497ba416b4
12.4 GB Download
md5:a20295230ac1bdeedb7bf41ce8686391
14.1 GB Download
md5:eba8ea32335fc70bc70491e985e5cf63
179.1 MB Download
md5:c7c9d4afc04ce1892b8de6ee9e27b556
1.6 GB Download