vib-singlecell-nf/vsn-pipelines: v0.27.0

Summary of changes

• Move to new config structure Closes #310 #314 e8b377d [BREAKING CHANGE]
• Include preliminary ATAC-seq workflows https://github.com/vib-singlecell-nf/vsn-pipelines/pull/362
• Add version check #355
• Fix bug sra pipeline not working for scATAC-seq data Closes #348
• Add multi-sample QC workflow 7f7c630
• [sratoolkit] Add maxSize option (-X option of prefetch) b5c7bae. This option should be set accordingly when running sra pipeline.
• Update Scanpy version to 1.8.1 #324 8370443
• [scanpy] Allow to set perplexity parameter for t-SNE e3b256a
• [scanpy] Implement additional flavors for computing HVG. Now possible to use: seurat, seurat_v3 and cell_ranger
• [scrublet] Update Scrublet Dockerfile to 0.2.3 8370443
• [harmony] Update Harmony to 1.0-3 74371bf
• [pcacv] Save PRESS errors in case it fails finding the optimal number of PCs 742f3bd