Published December 2, 2021
| Version v1
Dataset
Restricted
VesselExpress: Rapid and fully automated blood vasculature analysis in 3D light sheet image volumes of different organs
Authors/Creators
-
Spangenberg, Philippa
-
Hagemann, Nina
-
Squire, Anthony
-
Förster, Nils
-
Krauß, Sascha
- Qi, Yachao
- Yusuf, Ayan Mohamed
-
Grüneboom, Anika
-
Korste, Sebastian
- Totzek, Matthias
- Zülal, Cibir
-
Tuz, Ali Ata
-
Singh, Vikramjeet
- Struensee, Laura
-
Siemes, Devon
-
Engel, Daniel
-
Ludewig, Peter
- Melo, Luiza Martins Nascentes
-
Helfrich, Iris
-
Gunzer, Matthias
-
Hermann, Dirk
-
Mosig, Axel
Description
Sample dataset containing 3D light sheet microscopic images of blood vessels in the mouse brain (1.015625 x 1.015625 x 2.0 µm / pixel) for testing VesselExpress. Please find the software here: https://github.com/RUB-Bioinf/VesselExpress. For details on how to run and setup the software please watch our tutorial (https://youtu.be/a8GWVKJNh68).
Files
Restricted
The record is publicly accessible, but files are restricted. Log in to check if you have access.