Published November 23, 2021 | Version 1.0.1
Dataset Open

Long reads training material for 'Quality Control' tutorial (Galaxy Training Material)

Authors/Creators

  • 1. Cormier
  • 2. Bretaudeau
  • 3. Corre
  • 4. Robin
  • 5. Leroi

Description

The data provided here are part of a Galaxy Training Network tutorial for reads Quality Control.

PacBio HiFi reads were provided by PacBio - GIAB sample HG002 (https://www.pacb.com/smrt-science/smrt-resources/datasets/) and was downsampled using seqtk (https://github.com/lh3/seqtk)

Nanopore reads were provided by Tim Kahlke as part of "Long-Read, long reach Bioinformatics Tutorials" (https://timkahlke.github.io/LongRead_tutorials/) and was basecalled using Guppy v5.0.2 (dna_r9.4.1_450bps_sup.cfg).

Files

sequencing_summary.txt

Files (875.6 MB)

Name Size
md5:55060ea4a7ecaeca6dcaba637f77ceda
739.7 MB Download
md5:96dd7bfeda9997c851b70cbf2789cf5a
56.2 MB Download
md5:7345e73b4f23c77e751ac77b0e4c1705
79.6 MB Preview Download