Published December 1, 2021
| Version v.0
Dataset
Open
Cell type specificity of glucocorticoid signaling in the adult mouse hippocampus
Description
The present study is based on the 10X scRNA-seq dataset published by the Allen Institute for Brain Science and publicly available at: https://portal.brain-map.org/atlases-and-data/RNA-seq/mouse-whole-cortex-and-hippocampus-10x. The cells from the hippocampus region were selected from the gene count expression matrix and pre-processed in R v3.6.1 according to the Seurat v3.1.5 standard pre-processing workflow for quality control, normalization, and analysis of scRNA-seq data. Here we make the final seurat object and other datasets further used in the code (https://github.com/eviho/10XHip2021_VihoEMG) available for download.
Files
10XHip2021_GRN.matrix.csv
Additional details
Related works
- Is cited by
- Journal article: 10.1111/jne.13072 (DOI)
- Other: https://github.com/eviho/10XHip2021_VihoEMG (URL)