Paulinella micropora KR01 assembled transcripts

Description of files:

5RACE_Combined_D_L_assembly.fa

Transcripts assembled from 5-prime enriched RNA sequencing reads (cap-switching transcripts). Read data available from NCBI’s SRA repository (BioProject ID PRJNA730897).

Standard_RNAseq_transcripts.fa

Transcripts assembled from standard RNA sequencing reads (standard transcripts) that align to the P. micropora KR01 genome. Read data available from NCBI’s SRA repository (BioProject ID PRJNA568118).

5RACE_Combined_D_L_assembly_mapped.seqnames.txt

Names of the cap-switching transcripts that align to the P. micropora KR01 genome.

5RACE_Combined_D_L_assembly_unmapped.seqnames.txt

Names of the cap-switching transcripts that no not align to the P. micropora KR01 genome.

5RACE_SL_Transcripts.seqnames.txt

Names of the cap-switching transcripts that align to the P. micropora KR01 genome and encode a Paulinella spliced-leader sequence.

5RACE_SL_Transcripts_unique2RACE.seqnames.txt

Names of the cap-switching transcripts that align to the P. micropora KR01 genome, encode a Paulinella spliced-leader sequence, and are unique to the cap-switching dataset (i.e., are not encoded in the standard transcripts).

Standard_RNAseq_SL_transcripts.seqnames.txt

Names of the standard transcripts that align to the P. micropora KR01 genome and encode a Paulinella spliced-leader sequence.