Lesson Open Access

Salmon sci-RNA-seq3 tutorial

Sharma, Gaurav; Patro, Rob

This tutorial describes at how to process sci-RNA-seq3 reads using a salmon and alevin-fry based pipeline.

Files (6.4 GB)
Name Size
cell_annotations.txt
md5:c182952167432ea6279dfcfb97be4425
384.2 MB Download
cell_barcodes.txt
md5:94569270e62ab5020605ab5231efd541
3.2 MB Download
gene_annotation_table.txt
md5:808c452d0e537d045ca68242346413e9
3.8 MB Download
quantFiles.rds
md5:bc01fe5a0667df029297c1dd147e1cfd
30.9 MB Download
splici_idx_mouse_gencodeM25.tar.gz
md5:a510c5097ca9da9e2808c5affe8aafa6
5.9 GB Download
sra_runs.txt
md5:e5330ab2ecf7706fb1476f9898fdc101
110 Bytes Download
transcriptome_splici_fl52_t2g_3col.tsv
md5:3b5b55c62049e45db2cf646a43f22212
13.2 MB Download
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