Published November 6, 2021
| Version 1
Dataset
Open
LA1141 × OH8245 inbred backcross (IBC) single nucleotide polymorphism (SNP) markers for genetic studies
Authors/Creators
- 1. The Ohio State University, Department of Horticulture and Crop Science
Description
The LA1141 × OH8245 157 polymorphic SNP markers from an optimized tomato panel Sim et al., 2012 were used for linkage map construction in the BC2S3 IBC and composite interval mapping QTL analysis. Genetic map position and physical position corresponding to Sl4.0 (Hosmani et al., 2019), and flanking sequences are provided.
Notes
The LA1141 x OH8245 IBC population is available upon request
Files
Files
(26.1 kB)
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md5:bcf61c8c693647a2d1425dc2681ae0b8
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Additional details
References
- Hosmani PS, Flores-Gonzalez M, van de Geest H, et al. 2019. An improved de novo assembly and annotation of the tomato reference genome using single-molecule sequencing, Hi-C proximity ligation and optical maps. bioRxiv doi: https://doi.org/10.1101/767764
- Sim SC, Durstewitz G, Plieske J, et al. 2012. Development of a large SNP genotyping array and generation of high-density genetic maps in tomato. PLoS ONE doi.org/10.1371/journal.pone.0040563