Dataset Open Access

MethylSeq_2017

Ryan, Devon; Wolff, Joachim

This dataset is based on data from the publication "Hierarchical Clustering of Breast Cancer Methylomes Revealed Differentially Methylated and Expressed Breast Cancer Genes" (10.1371/journal.pone.0118453). It is a subset to use it as training material for a methyl-seq Galaxy course.

 

Thanks for the friendly permission from I-Hsuan Lin to use it. 

Files (9.2 GB)
Name Size
aligned_subset.bam
md5:53c45ef7743b3ae91e4fbff8febba8c7
123.6 MB Download
BT089_CpG.meth.bedGraph
md5:0b1f0498fd75aaa0f97fc713d6f29ad2
739.7 MB Download
BT089_CpG.meth_ucsc.bedGraph
md5:057b88822489bde9bdac12e3cedd25fe
814.6 MB Download
BT126_CpG.meth.bedGraph
md5:445e1e4b5da6b84123a416d6f96344dd
594.1 MB Download
BT126_CpG.meth_ucsc.bedGraph
md5:5bb70cd822882d3da226fbce8923dcb2
654.2 MB Download
BT198_CpG.meth.bedGraph
md5:789bcfa9389fdab511a2fb79329f6504
824.2 MB Download
BT198_CpG.meth_ucsc.bedGraph
md5:8449f7f6394667d12b8ce2d9d30c4ddf
907.5 MB Download
CpGIslands.bed
md5:03de12fe1ccc2de751c7023bdb2a21c7
814.0 kB Download
MCF7_CpG.meth.bedGraph
md5:14b00ee90c707c5760979f8ca95e7328
759.2 MB Download
MCF7_CpG.meth_ucsc.bedGraph
md5:39bf3f310206e0bd532486e97516ba48
836.1 MB Download
NB1_CpG.meth.bedGraph
md5:58165baab73721fb061f944eac0a10bf
462.5 MB Download
NB1_CpG.meth_ucsc.bedGraph
md5:0f77f9a6f14a0fa959b8a65ae4a0e06c
509.3 MB Download
NB2_CpG.meth.bedGraph
md5:735b653cd30d8d7ff92aa56982c5e795
815.7 MB Download
NB2_CpG.meth_ucsc.bedGraph
md5:989d0ba117cfed71b7d2be3c5712983d
898.3 MB Download
subset_1.fastq
md5:e1c9696124dcc2631fe0280c9c2f0743
133.8 MB Download
subset_2.fastq
md5:ab7061a53c9e1021f55146ec3eefa260
139.5 MB Download
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