Published September 1, 2022 | Version v1
Dataset Restricted

Intrasexual cuticular hydrocarbon dimorphism in a wasp sheds light on hydrocarbon biosynthesis genes in Hymenoptera

Authors/Creators

  • 1. Department of Evolutionary Biology and Ecology, Institute of Biology I (Zoology), Albert Ludwig University Freiburg, 79104 Freiburg, Germany
  • 2. Center for Molecular Biodiversity Research, Leibniz Institute for the Analysis of Biodiversity Change / ZFMK, Museum Koenig, Adenauerallee 160, 53113 Bonn, Germany
  • 3. Institute of Human Genetics, University of Würzburg, Am Hubland, 97074 Würzburg, Germany
  • 4. Department of Behavioral Physiology and Sociobiology, University of Würzburg, Am Hubland, 97074 Würzburg, Germany
  • 5. Department of Animal Ecology and Tropical Biology Biocenter, University of Würzburg, Am Hubland, 97074 Würzburg, Germany

Description

The dataset contains Supplementary Files from "Intrasexual cuticular hydrocarbon dimorphism in a wasp sheds light on hydrocarbon biosynthesis genes in Hymenoptera":

  • Odynerus spinipes draft genome assembly (ODSP_platanus.1.2.4.n0.s20.fa)
  • Soft-masked version of the draft genome (ODSP_platanus.1.2.4.n0.s20.fasta.softmasked)
  • Gene models of predicted protein-coding genes (ODSP_platanus.1.2.4.n0.s20_BRAKER1.9_annot.gff)
  • mRNA file of predicted gene protein-coding genes (mRNA_ODSP_platanus.1.2.4.n0.s20.fa)
  • Protein file of predicted gene protein-coding genes (ODSP_BRAKER_augustus_aa.fa)
  • Deseq2 results table (age class comparison) (AGE_DESEQ2_sign_results_ordered.xlsx)
  • EdgeR results table (age class comparison) (AGE_EdgeR_lrt_sign_results_ordered.xlsx)
  • qRT-PCR raw values (Expression_knock_downs_all_Apis_ids.xlsx)
  • Cuticular hydrocarbon compound abundances in Apis mellifera samples treated with dsRNA (CHCs_abundance_knock_downs_Apis_ids.xlsx)
  • Nucleotide sequence encoding green fluorescent protein (GFP) (Primer_GFP_sequence_used_Negative_contro_RNAi.doc)
  • Nucleotide sequence of candidate genes used for probe and dsRNA synthesis (Sequences_ISH_dsRNA_Apis_ids.fa)

Files

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