Published September 26, 2021 | Version v1

Exploring Kv1.2 channel inactivation through MD simulations and network analysis

  • 1. Sapienza University of Rome

Description

MD equilibration trajectories of Kv1.2 WT and mutants in dcd format can be visualized using visualization tools such as VMD or PyMol after uploading the topology file (.prmtop).

Files

Files (36.0 GB)

Name Size
md5:15a8e514b77af7f0a6bd390dae18f14e
3.7 GB Download
md5:9615a3fb6affceb11159c38079f260f9
56.9 MB Download
md5:a4580fcec1fcc586bfd5e5b711d36547
3.7 GB Download
md5:1e83e427bcfd5bf576eea4272fa1a99f
56.9 MB Download
md5:70686f145348e1ee748e8e1adfb137bd
3.7 GB Download
md5:b3d589c0448ce71dac40a3053667ff06
56.9 MB Download
md5:32f42875f2b381d3819659a47f7e333b
56.9 MB Download
md5:2b189df1db95d32542c4321aded302e7
3.3 GB Download
md5:a5e62e01be9b0f4fb0c088103749b2fc
3.7 GB Download
md5:affa7af48e3d0025cb596ddf016a0f0a
57.0 MB Download
md5:d3e98dd19a1cf81b361d1ffd212d36db
3.7 GB Download
md5:e84077e3ef2c3717128c3a5081ffa05e
56.9 MB Download
md5:4fedb9ba1132da7935ed9404173b6236
3.7 GB Download
md5:c6b571dc42edd9b9bb4f6d5b743e8470
56.9 MB Download
md5:adeeab0c58167a6ad3ce2aebca1f1308
3.7 GB Download
md5:05cf09e8825ff6a966528df37cf50aad
56.9 MB Download
md5:b804cda67c1889b1379b14985bed5a09
3.7 GB Download
md5:c1e32ed7c8e503886707c0d971ad81c1
56.9 MB Download
md5:6ac0e044cf92f24ded65d2bb065f720f
2.2 GB Download
md5:3cf07c7c17d77f554d47e0da625c2496
56.9 MB Download

Additional details

Related works

Is cited by
Journal article: 10.3389/fmolb.2021.784276 (DOI)

Funding

European Commission
HyGate - Hydrophobic Gating in nanochannels: understanding single channel mechanisms for designing better nanoscale sensors 803213

References

  • Exploring Kv1.2 channel inactivation through MD simulations and network analysis (2021), Frontiers in Molecular Bioscences