RNA-seq data of "Transcriptome analyses of leaves reveal that hexanoic acid priming differentially regulate gene expression in contrasting Coffea arabica cultivars"
Authors/Creators
- 1. Group of Genomics and Transcriptomics in Plants, Instituto de Biociências, São Paulo State University, Rio Claro, Brazil
- 2. Group of Genomics and Transcriptomics in Plants, Instituto de Biociências, São Paulo State University, Rio Claro, Brazil and State University of Londrina, UEL, Brazil
Description
This dataset represent FASTQ gziped files from the study "Transcriptome analyses of leaves reveal that hexanoic acid priming differentially regulate gene expression in contrasting Coffea arabica cultivars" (https://doi.org/10.3389/fsufs.2021.735893). Sequencing was done using an Illumina Novaseq 6000 instrument, paired-sequencing (2 X150 bp). Sample details are also available at https://www.ebi.ac.uk/ena/browser/view/ERA6282544.
All filenames have the following naming scheme:
LCS7609_DS_AAA_leafBBB_(R1 or R2).fq.gz
AAA stands for the abbreviations:
- CC (Coffea arabica cv Catuai control)
- CHx (Coffea arabica cv Catuai exposed to Hexanoic acid)
- OC (Coffea arabica cv Obatã control)
- OHx (Coffea arabica cv Obatã exposed to Hexanoic acid)
BBB stands for the number of biological replicate (1, 2 or 3).
Notes
Files
Files
(31.3 GB)
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md5:f1a6f1f0d0e532169dde6ba3cca55fe6
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Additional details
Related works
- Is source of
- https://www.ebi.ac.uk/ena/browser/view/ERA6282544 (URL)