Published June 9, 2014 | Version v1
Journal article Restricted

A combined morphological and molecular phylogeny of the genus Chironius Fitzinger, 1826 (Serpentes: Colubridae)

Description

Klaczko, Julia, Montingelli, Giovanna G., Zaher, Hussam (2014): A combined morphological and molecular phylogeny of the genus Chironius Fitzinger, 1826 (Serpentes: Colubridae). Zoological Journal of the Linnean Society 171 (3): 656-667, DOI: 10.1111/zoj.12147, URL: http://dx.doi.org/10.1111/zoj.12147

Files

Restricted

The record is publicly accessible, but files are restricted. <a href="https://zenodo.org/account/settings/login?next=https://zenodo.org/records/5310334">Log in</a> to check if you have access.

Linked records

Additional details

Identifiers

LSID
urn:lsid:plazi.org:pub:FFB91D41B8783756FF82FFC2FFB0FFFE

Related works

Has part
Figure: 10.5281/zenodo.5310336 (DOI)
Figure: 10.5281/zenodo.5310340 (DOI)
Figure: 10.5281/zenodo.5310342 (DOI)

References

  • Bremer K. 1994. Branch support and tree stability. Cladistics 10: 295-304.
  • Dingerkus G, Uhler LD. 1977. Enzyme clearing of Alcian Blue stained whole small vertebrates for demonstration of cartilage. Stain Technology 52: 229-232.
  • Dixon JR, Wiest JA, Cei JM. 1993. Revision of neotropical snake genus Chironius Fitzinger (Serpentes, Colubridae). Monografie XIII. Torino: Museo Regionale di Scienze Naturali.
  • Dowling HG, Duellman WE. 1978. Systematic herpetology: a synopsis of families and higher categories. New York: Herpetological Information Search System Publications.
  • Dunn ER. 1928. A tentative key and arrangement of the American genera of Colubridae. Bulletin of the Antivenim Institute of America 2: 18-24.
  • Felsenstein J. 1985. Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39: 783-791.
  • Frazzetta TH. 1966. Studies on the morphology and function of the skull in the Boidae (Serpentes). Part II. Morphology and function of the jaw apparatus in Python sebae and Python molurus. Journal of Morphology 118: 217-295.
  • Goloboff P, Farris J, Nixon K. 2008. T.N.T.: tree analysis using new technology. Available at: http://www.lillo.org.ar/ phylogeny/tnt/
  • Hall TA. 1999. BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symposium Series 41: 95-98.
  • Hollis JL. 2006. Phylogenetics of the genus Chironius Fitzinger, 1826 (Serpentes, Colubridae) based on morphology. Herpetologica 62: 435-453.
  • Katoh K, Kuma K, Toh H, Miyata T. 2005. MAFFT version 5: improvement in accuracy of multiple sequence alignment. Nucleic Acids Research 33: 511-518.
  • Katoh K, Misawa K, Kuma K, Miyata T. 2002. MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform. Nucleic Acids Research 30: 3059- 3066.
  • Klaczko J, Machado FA, Scrocchi G, Zaher H. 2010. Taxonomic status of Chironius multiventris and Chironius cochranae (Serpentes). Herpetologica 66: 476-484.
  • Knight A, Mindell DP. 1994. The phylogenetic relationship of Colubrinae, Elapidae and Viperidae and the evolution of front-fanged venom systems in snakes. Copeia 1994: 1-9.
  • Lawson R, Slowinski JB, Crother BI, Burbrink FT. 2005. Phylogeny of the Colubroidea (Serpentes): new evidence from mitochondrial and nuclear genes. Molecular Phylogenetics and Evolution 37: 581-601.
  • Maddison WP, Maddison DR. 2003. Mesquite: a modular system for evolutionary analysis. Version 2.75. Available at: http://mesquiteproject.org
  • Marques OAV, Eterovic A, Sazima I. 2001. Serpentes da Mata Atlantica - Guia Ilustrado. Ribeirao Preto: Editora Holos.
  • Marques OAV, Sazima I. 2003. Ontogenetic color changes may strengthen suggestion about systematic affinities between two species of Chironius (Serpentes, Colubridae). Phyllomedusa 2: 65-67.
  • Palumbi SR, Martin A, Romano S, McMillan WO, Stice L, Grabowski G. 1991. The simple fool's guide to P.C.R. Honolulu: University of Hawaii Press.
  • Pyron RA, Burbrink FT, Colli GR, Montes de Oca AN, Vitt LJ, Kuczynski CA, Wiens JJ. 2011. The phylogeny of advanced snakes (Colubroidea), with discovery of a new subfamily and comparison of support methods for likelihood trees. Molecular Phylogenetics and Evolution 58: 329- 342.
  • Pyron RA, Burbrink FT, Wiens JJ. 2013. A phylogeny and revised classification of Squamata, including 4161 species of lizards and snakes. BMC Evolutionary Biology 13: 93. Available at: http://www.biomedcentral.com/1471-2148/ 13/93
  • Rossman DA, Williams KL. 1966. Defensive behavior of the South American colubrid snakes Pseustes sulphureus (Wagler) and Spilotes pullatus (Linneaus). The Proceedings of the Louisiana Academy of Sciences 29: 152-156.
  • Savage JM. 2002. The amphibians and reptiles of Costa Rica, a Herpetofauna between two seas. Chicago, IL: The University of Chicago Press.
  • Stamatakis A. 2006. RAxML-VI-HPC: maximum likelihoodbased phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics 22: 2688-2690.
  • Stuart LC. 1932. Studies on Neotropical Colubrinae. I. The taxonomic status of the genus Drymobius Fitzinger. Occasional Papers of the Museum of Zoology, University of Michigan 236: 1-16.
  • Stuart LC. 1941. Studies on Neotropical Colubrinae. VIII. A revision of the genus Dryadophis Stuart 1939. Miscellaneous publications of the Museum of Zoology, University of Michigan 49: 1-106.
  • Uetz P, Hosek J. 2013. The reptile database. Available at: http:// www.reptile-database.org
  • Vidal N, Dewynter M, Gower DJ. 2010. Dissecting the major American snake radiation: a molecular phylogeny of the Dipsadidae Bonaparte (Serpentes, Caenophidia). Comptes Rendus Biologies 333: 48-55.
  • Vidal N, Kindl SG, Wong A, Hedges SB. 2000. Phylogenetic relationships of xenodontine Snakes from 12S and 16S ribosomal RNA sequences. Molecular Phylogenetics and Evolution 14: 389-402.
  • Zaher H. 1999. Hemipenial morphology of the South American xenodontine snakes, with a proposal for a monophyletic Xenodontinae and a reappraisal of Colubroid hemipenis. Bulletin of the American Museum of Natural History 240: 1-168.
  • Zaher H, Grazziotin FG, Cadle JE, Murphy RW, Moura- Leite JC, Bonatto SL. 2009. Molecular phylogeny of advanced snakes (Serpentes, Caenophidia) with an emphasis on South American Xenodontines: a revised classification and descriptions of new taxa. Papeis Avulsos de Zoologia 49: 115- 153.
  • Zaher H, Prudente AL. 2003. Hemipenes of Siphlophis (Serpentes, Xenodontinae) and techniques of hemipenial preparation in snakes: a response to Dowling. Herpetological Review 34: 295-302.