Published September 5, 2013 | Version v1

Figure 4 in The evolutionary history of the order Antipatharia (Cnidaria: Anthozoa: Hexacorallia) as inferred from mitochondrial and nuclear DNA: implications for black coral taxonomy and systematics

Description

Figure 4. ML-based phylogenetic reconstruction of the nuc-contig alignment. AIC within jModelTest selected the TIM3 + I + G model of nucleotide substitution (pinvar: 0.8420, gamma: 0.5910). ML parameters, outgroup selection, and character usage are the same as in Figure 2. Due to difficulty in amplifying and sequencing 18S and 28S for Elatopathes abietina and Stichopathes dissimilis, their sequences were chimeras comprising data from multiple individuals (USNM 1116469 & USNM 1116470 and LYM105-1 & MAN802-1, respectively).

Notes

Published as part of Brugler, Mercer R., Opresko, Dennis M. & France, Scott C., 2013, The evolutionary history of the order Antipatharia (Cnidaria: Anthozoa: Hexacorallia) as inferred from mitochondrial and nuclear DNA: implications for black coral taxonomy and systematics, pp. 312-361 in Zoological Journal of the Linnean Society 169 (2) on page 328, DOI: 10.1111/zoj.12060, http://zenodo.org/record/5287759

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Is cited by
Taxonomic treatment: http://treatment.plazi.org/id/DE793A5AFFB2ED4A13ADF90381E7FDFD (URL)
Is part of
Journal article: 10.1111/zoj.12060 (DOI)
Journal article: urn:lsid:plazi.org:pub:22404222FFA2ED591006FFD48017FFB6 (LSID)
Journal article: http://publication.plazi.org/id/22404222FFA2ED591006FFD48017FFB6 (URL)
Journal article: https://zenodo.org/record/5287759 (URL)