Published August 25, 2021 | Version v1

HD array with genoypes of a cross Iberian x Duroc pigs

  • 1. INIA-CSIC

Description

Nine candidate Duroc sires and 55 Iberian dams producing 214 Duroc × Iberian barrows were typed for the HD porcine Affymetrix array. This file contains the genotypes after using the AXIOM Analysis Suite. The format of the file is tped. The first four columms are chro:  chromosome number; rr: not in use and can be deleted; marker: marker name according to Affymentrix; pos: position in base pairs in the chromosome (Sscrofa 11.1). The last 562 columns correspond to the genotypes of 281 animals. Individuals with a name incuding "H" are crossbred barrows. Animals with a name including "padres" or "madres" are Iberian females. The last ones can also have H in the name. The rest of animals are Duroc sires. 

 

Notes

Genotyping was financed by National Spanish project AGL2016-75942-R (IBERFIRE).

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