Published April 27, 2020 | Version v1
Journal article Open

Critical Review of Processing and Classification Techniques for Images and Spectra in Microplastic Research

  • 1. Department of Environmental Science, University of California, Riverside, USA
  • 2. Research Group Christiansen, Helmholtz-Zentrum Berlin fu¨r Materialien und Energie, Berlin, Germany
  • 3. Department of Ecology and Evolutionary Biology, University of Toronto, Toronto, Canada
  • 4. NOAA Fisheries, James J. Howard Marine Sciences Laboratory at Sandy Hook, Highlands, USA
  • 5. HORIBA Scientific, Sunnyvale, USA
  • 6. Pattern Recognition Lab, Friedrich-Alexander-University Erlangen- Nuremberg, Erlangen, Germany
  • 7. Bavarian Health and Food Safety Authority, Erlangen, Germany
  • 8. TZW: DVGW-Technologiezentrum Wasser (German Water Centre), Karlsruhe, Germany
  • 9. Alfred-Wegener-Institute Helmholtz Centre for Polar and Marine Research, Helgoland, Germany

Description

Microplastic research is a rapidly developing field, with urgent needs for high throughput and automated analysis techniques.
We conducted a review covering image analysis from optical microscopy, scanning electron microscopy, fluorescence
microscopy, and spectral analysis from Fourier transform infrared (FT-IR) spectroscopy, Raman spectroscopy,
pyrolysis gas–chromatography mass–spectrometry, and energy dispersive X-ray spectroscopy. These techniques were
commonly used to collect, process, and interpret data from microplastic samples. This review outlined and critiques
current approaches for analysis steps in image processing (color, thresholding, particle quantification), spectral processing
(background and baseline subtraction, smoothing and noise reduction, data transformation), image classification (reference
libraries, morphology, color, and fluorescence intensity), and spectral classification (reference libraries, matching procedures,
and best practices for developing in-house reference tools). We highlighted opportunities to advance microplastic
data analysis and interpretation by (i) quantifying colors, shapes, sizes, and surface topologies with image analysis software,
(ii) identifying threshold values of particle characteristics in images that distinguish plastic particles from other particles, (iii)
advancing spectral processing and classification routines, (iv) creating and sharing robust spectral libraries, (v) conducting
double blind and negative controls, (vi) sharing raw data and analysis code, and (vii) leveraging readily available data to
develop machine learning classification models. We identified analytical needs that we could fill and developed supplementary
information for a reference library of plastic images and spectra, a tutorial for basic image analysis, and a code to
download images from peer reviewed literature. Our major findings were that research on microplastics was progressing
toward the use of multiple analytical methods and increasingly incorporating chemical classification. We suggest that new
and repurposed methods need to be developed for high throughput screening using a diversity of approaches and highlight
machine learning as one potential avenue toward this capability.

Notes

S. Primpke was supported by the German Federal Ministry of Education and Research (Project BASEMAN (JPI-Oceans)– Defining the baselines and standards for microplastics analyses in European waters; BMBF grant 03F0734A).W. Cowger was supported by the National Science Foundation Graduate Research Fellowship. A. Gray was supported in part by the USDA National Institute of Food and Agriculture, Hatch program (project number CA-R-ENS-5120-H), USDA Multistate Project W4170 funds, and UCANR AES Mission funds. G. Sarau, L. Mill, and S. Christiansen acknowledge the financial support from the German Research Foundation (DFG), German Federal Ministry for Education and Research (BMBF), and European Union within the research projects FOR 1616, HIOS, CC-Sens, and npSCOPE. B. Ossmann thanks the Bavarian State Ministry of the Environment and Consumer Protection for financial support. European Commission Horizon 2020

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Additional details

Funding

European Commission
HIOS - Highly Integrated Optoelectronic Sensor 720531
European Commission
npSCOPE - The nanoparticle-scope : a new integrated instrument for accurate and reproducible physico-chemical characterisation of nanoparticles (npSCOPE) 720964