Published August 20, 2021 | Version v1
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Molecular Dynamics Dataset - Dynamics of GLP-1R peptide agonist engagement are correlated with kinetics of G protein activation

  • 1. Coventry University

Description

Molecular dynamics simulations of the glucagon-like peptide receptor (GLP-1R) in complex with Gs protein and four different agonist peptides: GLP-1, exendin-4, oxyntomodulin, and exendin-P5. 

For each system, the .xtc file is the result of the merging of 4 replicas of 500 ns for a total of 2 microseconds (8 microseconds considering all four GLP-1R complexes). The original MD trajectories have been stripped of water, ions and phosphatidylcholine atoms before the upload. The CHARMM36 force field was used.

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