Published August 20, 2021 | Version v1

Molecular Dynamics Dataset - Dynamics of GLP-1R peptide agonist engagement are correlated with kinetics of G protein activation

Authors/Creators

  • 1. Coventry University

Description

Molecular dynamics simulations of the glucagon-like peptide receptor (GLP-1R) in complex with Gs protein and four different agonist peptides: GLP-1, exendin-4, oxyntomodulin, and exendin-P5. 

For each system, the .xtc file is the result of the merging of 4 replicas of 500 ns for a total of 2 microseconds (8 microseconds considering all four GLP-1R complexes). The original MD trajectories have been stripped of water, ions and phosphatidylcholine atoms before the upload. The CHARMM36 force field was used.

Files

Files (5.7 GB)

Name Size
md5:f6ab7258d6cedc3ee89941e0c7fd299f
4.4 MB Download
md5:cc6a27669644050ea64bc96ed6ade150
1.4 GB Download
md5:b5e27f33ce981c6f12b5ee660ab07ae5
4.4 MB Download
md5:f52126c9d8baa4375caaba4e31cfeaa1
1.4 GB Download
md5:c894a27dc4c4abcaaccb3072cec98ce4
4.4 MB Download
md5:7ae7588b9ea23c0045ec03e41c8b304c
1.4 GB Download
md5:d59da7e006fe939625fd594eb228b524
4.4 MB Download
md5:46b2b6ea3d14bb01b5f8da2a740449c1
1.4 GB Download