Published August 16, 2021 | Version 1

Gene annotations and associated FASTA file of Antechinus flavipes (yellow-footed antechinus)

Authors/Creators

  • 1. Nanjing Normal University

Description

Gene annotations of Antechinus flavipes (yellow-footed antechinus) associated with the manuscript "A chromosome-level genome of Antechinus flavipes provides a reference for an Australian marsupial genus with male death after mating" (Molecular Ecology Resources, accepted).

Annotation file and associated FASTA files for A. flavipes assembly AdamAnt. 
• AdamAnt.gff3.tar.gz: EVidenceModeler (EVM) gene model annotation file for A. flavipes assembly AdamAnt.
• AdamAnt.CDS.fa.tar.gz: EVM gene models coding sequences.
• AdamAnt.AA.fa.tar.gz: EVM gene models coding sequences translated into amino acid sequences.

Annotation file and associated FASTA files for A. flavipes transcriptome assembly generated using ROPUS (Reference-guided Ortholog Pipeline for Unannotated species; see doi:10.5281/zenodo.3722900). 
• antechinus_flavipes_ROPUS_CDS_annotated.fa.tar.gz: ROPUS CDS set. Annotated using human as the reference species.
• antechinus_flavipes_ROPUS_AA_annotated.fa.tar.gz: ROPUS AA set. Translated using the CDS sequence. 
• antechinus_flavipes_ROPUS_annotated.gff3.tar.gz: annotation file for gene expression analysis using the A. flavipes ROPUS CDS FASTA.

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