Dataset Open Access
Training data for MaxQuant and Msstats TMT analysis in Galaxy
Klemens Fröhlich;
Matthias Fahrner;
Melanie C. Föll
The files serve as input and intermediate results for a MaxQuant and MsstatsTMT training on lysine methyl transferase 9 knockdown and control cell proteomics (https://doi.org/10.1186/s12935-020-1141-2) in the Galaxy training network (https://training.galaxyproject.org).
Input files: human FASTA protein database for Maxquant. MaxQuant experimental design template, MSstatsTMT annotation file
Intermediate result files: MaxQuant protein groups and evidence
Files
(77.0 MB)
| Name | Size | |
|---|---|---|
|
annotation_exercise.txt
md5:39c598a712d27eb7b0261ee973e6f940 |
9.8 kB | Download |
|
MaxQuant experimental design template.tabular
md5:1aa6a0401ae30d0f3e09429881f7a22b |
296 Bytes | Download |
|
MaxQuant Result evidence.tabular
md5:137505944ef61ce519a339586617890a |
57.6 MB | Download |
|
MaxQuant Result protein groups.tabular
md5:092d644f2010a55d1c54762809115672 |
5.7 MB | Download |
|
MSstatsTMT annotation file.tabular
md5:60f8ae4de39a2ce3228d447c1cb8022b |
6.5 kB | Download |
|
protein_database.fasta
md5:ecd70d810a9a44d13bebc7abd5c12628 |
13.6 MB | Download |
198
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views
downloads
| All versions | This version | |
|---|---|---|
| Views | 198 | 179 |
| Downloads | 333 | 331 |
| Data volume | 3.2 GB | 3.2 GB |
| Unique views | 155 | 147 |
| Unique downloads | 169 | 168 |
Indexed in
- Publication date:
- August 12, 2021
- DOI:
-
- License (for files):
- Creative Commons Attribution 4.0 International