Biodiversity Literature Repository

Submit to community
Liberated Data
Published August 10, 2016 | Version v1
Journal article Restricted

New Parabathynellidae species in Africa: the first bathynellids from Chad and an assay of their phylogenetic position in the order Bathynellacea (Crustacea: Malacostraca) based on 18S sequences

Authors/Creators

  • 1. Museo Nacional de Ciencias Naturales (CSIC), Dpto. Biodiversidad y Biología Evolutiva, C/ José Gutiérrez Abascal 2, 28006-Madrid, Spain;
  • 2. National Institute of Biology, Večna pot 111, 1000 Ljubljana, Slovenia; & School for Natural Sciences, Unversity of Nova Gorica, Vipavska c. 13, 5000 Nova Gorica, Slovenia;
  • 3. Museo Nacional de Ciencias Naturales (CSIC), Dpto. de Colecciones. Col. de Tejidos y ADN, C/ José Gutiérrez Abascal 2, 28006-MADRID (Spain)

Description

Camacho, A.I., Brancelj, A., Dorda, B.A., Casado, A., Rey, I. (2016): New Parabathynellidae species in Africa: the first bathynellids from Chad and an assay of their phylogenetic position in the order Bathynellacea (Crustacea: Malacostraca) based on 18S sequences. Journal of Natural History 50: 2691-2726, DOI: 10.1080/00222933.2016.1210260, URL: http://dx.doi.org/10.1080/00222933.2016.1210260

Files

Restricted

The record is publicly accessible, but files are restricted to users with access.

Linked records

Additional details

Identifiers

LSID
urn:lsid:plazi.org:pub:FFEEFFB08E718A50FFD4FF95FFAA1A7E
URL
http://publication.plazi.org/id/FFEEFFB08E718A50FFD4FF95FFAA1A7E

Cites
Publication: 10.1163/193724012X638473 (DOI)
Publication: 10.3989/graellsia.2013.v69.086 (DOI)
Publication: 10.1080/00222933.2013.768361 (DOI)
Publication: 10.1080/00222933.2015.1083621 (DOI)
Publication: 10.1071/ZO12061 (DOI)
Publication: 10.1371/journal (DOI)
Has part
Taxonomic treatment: http://treatment.plazi.org/id/03D787C88E768A57FEB9FC78FED01F20 (URL)
Taxonomic treatment: http://treatment.plazi.org/id/03D787C88E768A58FE7FFA0EFD7B1B08 (URL)
Taxonomic treatment: http://treatment.plazi.org/id/03D787C88E798A5DFE1EFE26FDAF1F1A (URL)
Taxonomic treatment: 10.5281/zenodo.5195233 (DOI)
Taxonomic treatment: http://treatment.plazi.org/id/03D787C88E7C8A5FFEBBFA34FBC41B2A (URL)
Taxonomic treatment: http://treatment.plazi.org/id/03D787C88E7E8A70FE72FE05FDCE1947 (URL)
Figure: 10.5281/zenodo.5189340 (DOI)
Figure: 10.5281/zenodo.5189342 (DOI)
Figure: 10.5281/zenodo.5189344 (DOI)
Figure: 10.5281/zenodo.5189346 (DOI)
Figure: 10.5281/zenodo.5189348 (DOI)
Figure: 10.5281/zenodo.5189350 (DOI)

References

  • Abrams KM, Guzik MT, Cooper SJB, Humphreys WF, King RA, Cho J-L, Austin AD. 2012. What lies beneath: molecular phylogenetics and ancestral state reconstruction of the ancient subterranean Australian Parabathynellidae (Syncarida, Crustacea). Mol. Phylogenet. Evol. 64:130-164.
  • Alda F, Rey I, Doadrio I. 2007. An improved method of extracting degraded DNA samples from birds and other species. Ardeola. 54:331-334.
  • Altschul SF, Madden TL, Schaeffer AA, Zhang J, Zhang Z, Miller W, Lipman DJ. 1997. Gapped blast and psi-blast: a new generation of protein database search programs. Nucleic Acids Res. 25:3389-3402.
  • Bou C. 1974. Les methodes de recolte dans les eaux souterraines interstitielles. Ann. Speleol. 29:611-619.
  • Boutin C, Coineau N. 1987. Iberobathynella sur le continent Africain. Implications paleogeographiques. C. R. l 'Acad. Sci. Paris. 304, Serie III. 13:355-358.
  • Brancelj A. 2004. Biological sampling methods for epikarst water. In: Jones WK, Culver DC, Hernan JS, editors. Epikarst: proceedings of the symposium held October 1 through 4, 2003, Sheperdstown, West Virginia (USA). Special Publication, 9. Charles Town (West Virginia). Charles Town: Karst Water Institute; p. 99-103.
  • Brancelj A. 2015. Two new stygobiotic copepod species from the Tibesti area (Northern Chad) and re-description of Pilocamptus schroederi (van Douwe, 1915). Zootaxa. 3994(4):531-555.
  • Camacho AI. 1987. A new subterranean Sincarid (Crustacea) fron Spain: Iberobathynella imuniensis n. sp. (Bathynellacea, Parabathynellidae). Arch. Hydrobiol. 111(1):137-149.
  • Camacho AI. 2003. Four new species of groundwater crustaceans (Syncarida, Bathynellacea, Parabathynellidae) endemic to the Iberian Peninsula. J. Nat. Hist. 37:2885-2907.
  • Camacho AI. 2005. Disentangling an Asian puzzle: two new bathynellid (Crustacea, Syncarida, Parabathynellidae) genera from Vietnam. J. Nat. Hist. 39(31):2861-2886.
  • Camacho AI. 2007a. A new species of Iberobathynella Schminke, 1973 (Syncarida, Bathynellacea, Parabathynellidae) in the South of the Iberian Peninsula. Graellsia. 63(2):339-347.
  • Camacho AI. 2007b. The first record of the genus Vejdovskybathynella Serban and Leclerc, 1984 (Syncarida, Bathynellacea, Bathynellidae) in the Iberian Peninsula: three new species. J. Nat. Hist. 41(45-48):2817-2841.
  • Camacho AI, Dorda BA, Rey I. 2011. Identifying cryptic speciation across groudwater populations: first COI sequences of Bathynellidae (Crustacea, Syncarida). Graellsia. 67(1):7-12.
  • Camacho AI, Dorda BA, Rey I. 2012. Undisclosed taxonomic diversity of Bathynellacea (Malacostraca: Syncarida) in the Iberian Peninsula revealed by molecular data. J. Crust. Biol. 32 (5):816-826. doi:10.1163/193724012X638473.
  • Camacho AI, Dorda BA, Rey I. 2013a. Integrating DNA and morphological taxonomy to describe a new species of the family Bathynellidae (Crustacea, Syncarida) from Spain. Graellsia. 69(2):179- 200. doi:10.3989/graellsia.2013.v69.086.
  • Camacho AI, Dorda BA, Rey I. 2013b. Old and new taxonomic tools: description of a new genus and two new species of Bathynellidae family from Spain with morphological and molecular characters. J. Nat. Hist. 47(21-22):1393-1420. doi.org/10.1080/00222933.2013.768361.
  • Camacho AI, Hancock P. 2010. A new record of Parabathynellidae (Crustacea, Bathynellacea) in Australia: a new genus and species from New South Wales. J. Nat. Hist. 44(17-18):1081-1094.
  • Camacho AI, Newell RL, Crete Z, Dorda BA, Casado A, Rey I. 2015. Northernmost discovery of Bathynellacea (Syncarida: Bathynellidae) with description of a new species of Pacificabathynella from Alaska (USA). J. Nat. Hist. 2015. doi.org/10.1080/00222933.2015.1083621.
  • Camacho AI, Serban E. 1998. Tribu des Iberobathynellini nov., diagnoses des taxa nouveaux (Parabathynellidae, Bathynellacea, Podophallocarida). Trav. l 'Inst. Speleol. " E. Racovitza ". 34:15-75.
  • Capart. 1951. Thermobathynella adami gen et sp. nov., Anaspidace du Congo Belge. Bull d 'Inst. Royal Sci. Nat., Belgique. 278(10):1-4.
  • Chappuis PA. 1915. Bathynella natans und ihre Stellung im System. Zool. Jahrb. XL:147-176.
  • Cho JL. 1995. Systematok und Biogeographie von Hexabathynella Schminke, 1973 sowie ein Beitrag zur Taxonomie der "Leptobathynellinae" Noodt, 1964 (Bathynellacea, Syncarida, Malacostraca). Dissertation zur Erlangung des Doktorgrades, Universitat zu Kiel, unpublished.
  • Cho JL. 1997. Two new species of a new genus of Leptobathynellinae (Crustacea, Bathynellacea) from California, USA. Korean J. Biol. Sci. 1:265-270.
  • Cho JL. 2005. A primitive representative of the Parabathynellidae (Bathynellacea, Syncarida) from Yilgarn Craton of Western Australia. J. Nat. Hist. 39:3423-3433.
  • Cho JL, Humphreys WF, 2010. Ten new species of the genus Brevisomabathynella Cho, Park and Ranga Reddy, 2006 (Malacostraca, Bathynellacea, Parabathynellidae) from Western Australia. J. Nat. Hist. 44(17-18):993-1079.
  • Cho JL, Humphreys WF, Lee SD. 2006. Phylogenetic relationships within the genus Atopobathynella Schminke (Bathynellacea: Parabathynellidae). Invert. Syst. 20:9-41.
  • Cho JL, Park JG, Ranga Reddy Y. 2006. Brevisomabathynella gen. nov. with two new species from Western Australia (Bathynellacea, Syncarida): the first definitive evidence of predation in Parabathynellidae. Zootaxa, 1247:25-42.
  • Cho JL, Schminke HK. 2001. A revision of the genus Parvulobathynella Schminke, 1973 (Bathynellacea, Parabathynellidae): with the description of two new species from South Africa. Crustaceana. 74(8):777-796.
  • Cho JL, Schminke HK. 2006. A phylogenetic review of the genus Hexabathynella Schminke, 1972 (Crustacea, Malacostraca, Bathynellacea): with a description of four new species. Zool. J. Linn. Soc. 147:71-96.
  • Coineau N, 1967. Acanthobathynella, nouveau genre de Syncaride africain (Cote d 'Ivoire). C. R. l 'Acad. Sci. Paris ser. D. 265:1988-1990.
  • Coineau N, Knoepffler LPh. 1971. Une nouvelle Parabathynelle (Crustaces, Syncarides) de Republique Centrafricaine. Biolo. Gabonica. 107(1):57-65.
  • Coineau N, Serban E. 1978. Sur les Parabathynellidae (Podophallocarida, Bathynellacea) d 'Afrique du Sud, Ctenophallonella mutlumuviensis n. g. n. sp. Bull. Mus. Nat. d 'Hist. Nat., Paris, 510, Zoologie. 351:71-89.
  • Cook BD, Abrams KM, Marshall J, Perna ACN, Choy AS, Guzik AMT, Cooper SJB. 2012. Species diversity and genetic differentiation of stygofauna (Syncarida: Bathynellacea) across an alluvial acquifer in north-eastern Australia. Aus. J. Zool. dx.doi.org/10.1071/ZO12061.
  • Delamare Deboutteville C. 1953. Une espece nouvelle de Parabathynella a Madagascar: Parabathynella pauliani. Diagnose preliminaire. Vie Milieu. 4(4):748.
  • Delamare Deboutteville C, Angelier E. 1950. Sur un type de Crustace phreaticole nouveau: Parabathynella fagei n. sp. C. R. Hebdo. l 'Acad. Sci. Paris. 231:175-176.
  • Delamare Deboutteville C, Chappuis PA. 1955. Un Syncaride nouveau sur les bords du Tanganyka. Notes Biospeol. 10:81-87.
  • Delamare Deboutteville C, Paulian R. 1954. Recherches sur la faune interstitielle des sediments marins et d 'eau douce au Madagascar. V. Decouverte de l 'ordre des Syncarides. Description de trois especes nouvelles. Mem. Inst. Sci. Madagascar, A. 9:75-89.
  • Delamare Deboutteville C, Serban E. 1979. Odontobathynella amazonica n. g. n. sp. Leptobathynellidae nouveau du Bresil (Malacostraca, Bathynellacea). Bull. Soc. Sci. Nat. Tunisie. 14:5-20.
  • Drewes J, Schminke HK. 2007. Number of families within Bathynellacea (Malacostraca) and year of publication of their names, with redescriptions of Baikalobathynella magna (Bazikalova, 1954) from Lake Baikal. Crustaceana. 84(11):1377-1401.
  • Dumont HJ. 1981. Cteniobathynella essaumeri n. sp., the first representative of the Bathynellacea (Crustacea) in the Central Sahara. Rev. d 'Hydrobiol. Tropicale. 14(1):59-62.
  • Dumont HJ. 1984. Nilobathynella predynastica n. g., n. sp. (Crustacea, Bathynellacea) from the Nile valley in Nubia. Hydrobiologia. 110:171-175.
  • Dumont HJ. 2014. Odonata from the Tibesti Mountains and the Ounianga Lakes in Chad, with notes on Hemianax ephippiger accumulating in the desert. Odonatologica. 43:13-24.
  • Felsenstein J. 1981. Evolutionary trees from DNA sequences: a maximum likelihood approach. J. Mol. Evol. 17:368-376.
  • Felsenstein J. 1985. Confidence limits on phylogenies: an approach using the bootstrap. Evolution. 39:783-791.
  • Felsenstein J, Kishino JH. 1993. Is there something wrong with the bootstrap on phylogenies? A reply to Hillis and Bull. Syst. Biol. 42:193-200.
  • Fryer G. 1957. A new species of Parabathynella (Crustacea, Syncarida) from the psammon of Lake Bangweulu, Central Africa. Ann. Mag. Nat. Hist., ser. 12. 10(10):116-120.
  • Gilbert MTP, Moore W, Melchior L, Worobey M. 2007. DNA extraction from dry museum beetles without conferring external morphological damage. PLoS ONE. 2:e272.
  • Giribet, G., Carranza, S., Baguna, J., Riutort, M., Ribera, C. (1996). First molecular evidence for the existence of a Tardigrada + Arthropoda clade. Mol. Biol. Evol. 13(1):76-84.
  • Giribet G, Ribera C. 2000. A review of arthropod phylogeny: new data based on ribosomal DNA sequences and direct character optimization. Cladistics. 16:204-231.
  • Green J. 1964. Two new species of Parabathynella (Crustacea: Syncarida) from Lake Albert, Uganda. Proc. Zool. Soc. London. 142(4):582-592.
  • Grobben K. 1905. Lehrbuch der Zoologie, begrundet von C. Claus, neubearbeitet von Dr Karl Grobben. Vol. 1, 7th ed. Essen: [publisher unknown], 995 pp.
  • Gu X, Fu YX, Li WH. 1995. Maximum likelihood estimation of the heterogeneity of substitution rate among nucleotide sites. Mol. Biol. Evol. 12:546-557.
  • Guo F-F, Dumont HJ. 2014. Relict populations of Diaphanosoma (Cladocera: Ctenopoda) in the Chadian Sahara, with the description of a new species. Zootaxa. 3856:135-142.
  • Huelsenbeck JP, Ronquist F. 2001. MrBayes: Bayesian inference of phylogenetic trees. Bioinformatics. 17:754-755.
  • Jakobi H. 1958. Brasilibathynella florianopolis n. gen. n. sp. Ein neuer Genus der Grundwasserfamilie Bathynellidae (Grobben) aus der Duenenzone der Insel Santa Catarina Suedbrasilien. Dusenia. 8 (1):25-36.
  • Leveque C. 1990. Relict tropical fish fauna in Central Sahara. Ichth. Expl. Freshw. 1:39-48.
  • Noodt W. 1965. Naturliches System und Biogeographie der Syncarida. Gewasser und Abwasser. 37/ 38(1964):77-186.
  • Por PD. 1968. Parabathynella calmani n. sp. (Syncarida, Bathynellacea) from Israel. Crustaceana. 14 (2):151-154.
  • Posada D, Crandall KA. 1998. Model test: testing the model of DNA substitution. Bioinformatics. 14:817-818.
  • Ronquist F, Huelsenbeck JP. 2003. MrBAYES 3: Bayesian phylogenetic inference under mixed models. Bioinformatics. 19:1572-1574.
  • Schminke HK. 1972. Hexabathynella halophila gen. n., sp. n. und die Frage nach der marinen Abkunft der Bathynellacea (Crustacea, Malacostraca). Mar. Biol. 15:282-287.
  • Schminke HK. 1973. Evolution, System und Verbreitungsgeschichte der Familie Parabathynellidae (Bathynellacea, Malacostraca). Akad. Wiss. Lit. Mainz, Math-Naturwiss. Klasse, Mikrofauna Meeresbodens. 24:1-192.
  • Schminke HK. 1976. Systematische Untersuchungen auf Grundwasserkrebsen eine Bestandsaufnahme (mit der Beschreibung zweier neuer Gattungen der Familie Parabathynellidae, Bathynellacea). Internat. J. Speleol. 8:195-216.
  • Schminke HK. 1979. Nannobathynella eburnea sp. n. und die Verbreitung der Bathynellidae (Bathynellacea, Syncarida) in den Tropen. Arch. Hydrobiol. 86(1):112-124.
  • Schminke HK. 1980. Agnatobathynella ecclesi gen. n., sp. n. aus Malawi und die Formenvielfalt der familie Bathynellidae (Crustacea, Bathynellacea). Bijd Dierk. 50(1):145-154.
  • Schminke HK. 2011. Arthropoda: Crustacea: Malacostraca: Bathynellacea: Parabathynellidae. In: Flora and fauna of Korea. Invertebrate fauna of the world. Volume 21 (1). Incheon (Republic of Korea): National Institute of Biological Resources (NIBR). Chong-chun Kim.
  • Schminke HK, Wells JBJ. 1974. Nannobathynella africana sp. n. and the zoogeography of the family Bathynellidae (Bathynellacea, Malacostraca). Arch. Hydrobiol. 73(1):122-129.
  • Serban E. 1972. Bathynella (Podophallocarida, Bathynellacea). Trav. Instit. Speol. " E. Racovitza ". 11:11-225.
  • Serban E. 1980. La mandibule et l 'individualisation des ensembles evolutifs majeurs dans l 'ordre des Bathynellacea (Malacostraca: Podophallocarida). Bijd Dierk. 50(1):155-189.
  • Serban E. 1985. Le developpement postembryonnaire chez Gallobathynella coiffaiti (Delamare) (Gallobathynellinae: Bathynellidae: Bathynellacea). Trav. Inst. Speleol. " E. Racovitza ". 24:47-61.
  • Serban E, Coineau N. 1975a. Haplophallonella heterodonta n. g., n. sp. Parabathynellide (Podophallocarida, Bathynellacea) d 'Afrique (Cote d 'Ivoire). Trav. Inst. Speleol. " E. Racovitza ". 14:51-70.
  • Serban E, Coineau N. 1975b. Sur les Bathynellidae (Podophallocarida, Bathynellacea) d 'Afrique du Sud. Les genres Transvaalthynella nov. et Transkeithynella nov. Ann. Speleol. 30(1):137-165.
  • Serban E, Coineau N. 1982. Lamtobathynella pentodonta n. g. n. sp. Leptobathynellide nouveau d 'Afrique (Cote d 'Ivoire) (Malacostraca, Bathynellacea). Internat. J. Speleol. 10(3):69-74.
  • Serban E, Coineau N. 1990. Donnees concernant le developpement pst-embryonnaire dans la famille des Parabathynellidae Noodt (Bathynellacea, Podophallocarida, Malacostraca). Trav. Inst. Speleol. " E. Racovitza ". 29:3-24.
  • Serban E, Coineau N. 1994. Racovitzaibathynella emilei n. g. n. sp. et R. transvaalensis n. sp. (Bathynellacea, Podophallocarida). Trav. Inst. Speleol. " E. Racovitza ". 33:11-30.
  • Serban E, Coineau N, Delamare Deboutteville C. 1971. Les Gallobathynellinae, nouvelle sousfamille des Bathynellacea. C. R. Hebdomadaires Acad. Sci. Paris 272, ser. D(23):2907-2909.
  • Serban E., Leclerc P. 1984. Cinq taxa nouveaux des Bathynellides de France (Bathynellacea, Podophallocarida, Malacostraca). Trav. Inst. Speleol. " E. Racovitza ". 23:7-18.
  • Swofford DL. 2002. PAUP*: Phylogeny Analysis Using Parsimony (*and other methods), version 4.0b10. Sunderland, MA: Sinauer Associates Inc.
  • Swofford DL, Olsen GL, Waddell PJ, Hillis DM. 1996. Phylogenetic inference. In: Hillis DM, Moritz C, Mable BK, editors. Molecular systematics, 2nd ed. Sunderland, MA: Sinauer Associates, p. 407- 514.
  • Tamura K, Peterson D, Peterson N, Stecher G, Nei M, Kumar S. 2011. MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol. Biol. Evol. 28:2731-2739.
  • Thomson GM. 1893. Notes on Tasmaia Crustacea, with description of new species. Pap & Proc Roy Soc Tasmania. 26:45-76.
  • Times Atlas of the World. 1990. Times atlas of the world. Comprehensive edition. London: Times Books, 123 pl. + 225 pp.
  • Trape S. 2009. Impact of climate change on the relict tropical fish fauna of Central Sahara: threat for the survival of Adrar Mountains fishes, Mauritania. PLoS ONE. 4(2):e4400. doi:10.1371/journal. pone.0004400.
  • Yang Z. 1994. Estimating the pattern of nucleotide substitution. J. Mol. Evol. 39:105-111.
  • Zwickl DJ. 2006. Genetic algorithm approaches for the phylogenetic analysis of large biological sequence datasets under the maximum likelihood criterion [dissertation]. University of Texas at Austin.
  • Zwickl DJ, Balhoff J. 2006. GARLI v. 0.954.