Simulation data for "Phylogenetic analysis of migration, differentiation, and class switching in B cells"

Simulation data for https://doi.org/10.1101/2020.05.30.124446.

Scripts available at: https://bitbucket.org/kleinstein/projects/src/master/Hoehn2020/

data_twostate.tsv: AIRR TSV file of data used for simulations

trees_twostate.RData: Tree topologies used to simulate migration

simulations.tar.gz: Files used in simulation analyses. File names show:

<rate (r)>_<rate A to B (r_ab)>_<pi_A>_<repetition>

laddersims.tar.gz: Files used in ladder tree simulation analyses. File names show:

<rate (r)>_<rate A to B (r_ab)>_<pi_A>_<number of tips>_<number of trees>_<repetition>