Multiple sequence alignments of Treponema pallidum complete genomes using three different references for mapping NGS reads
Authors/Creators
- 1. Joint Research Unit Infection and Public Health FISABIO-University of Valencia, I2SysBio, Valencia, Spain
Description
Each file corresponds to the multiple sequence alignment of 75 complete Treponema pallidum genome sequences using the genomes of strains Nichols, SS14, and CDC-2 as references for mapping. This is supplemental data to the manuscript "Evolutionary processes in the emergence and recent spread of Treponema pallidum, the causative agent of syphilis" by Marta Pla-Díaz, Leonor Sánchez-Busó, Lorenzo Giacani, David Šmajs, Philipp P. Bosshard, Homayoun C. Bagheri, Verena J. Schuenemann, Kay Nieselt, Natasha Arora and Fernando González-Candelas
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