Published July 27, 2021 | Version v1
Dataset Open

CircaSCOPE demo input for CellProfiler pipeline

Authors/Creators

  • 1. Weizmann Institute of Science

Description

This is a demo dataset to use as input images for the CellProfiler pipeline of CircaSCOPE. Images were retrieved with IncuCyte Zoom  microscope (Essen BioScience). 

The images are arranged in directories as follows: YYMM/HH/Vessel/Well-Site-Channel.tif

[YY - year,

MM - month,

HH - hour,

Vessel - the vessel number, in this demo- 479 contains untreated control, and 480 contains 100nM Dexamethasone-treated cells

Well - coordinates in 24-well plate

Site - the field of view number inside each well, between 1-16

Channel - C1- green, C2- red, P- phase]

 

 

Files

ScanData.zip

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