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Molecular systematics of Serrasalmidae: Deciphering the identities of piranha species and unraveling their evolutionary histories

  • 1. Dept. of Biological Sciences, Florida International University, University Park, Miami, FL 33199, USA. United States Geological Survey, 7920 NW 71st St., Gainesville, FL 32653, USA. E-mail: Leo_Nico@usgs.gov Corresponding author. E-mail: CollinsT@fiu.edu

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Freeman, Barbie, Nico, Leo G., Osentoski, Matthew, Jelks, Howard L., Collins, Timothy M. (2007): Molecular systematics of Serrasalmidae: Deciphering the identities of piranha species and unraveling their evolutionary histories. Zootaxa 1484 (1): 1-38, DOI: 10.11646/zootaxa.1484.1.1, URL: https://biotaxa.org/Zootaxa/article/view/zootaxa.1484.1.1

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References

  • Agostinho, C.S., Agostinho, A.A., Marques, E.E. & Bini, L.M. (1997) Abiotic factors influencing piranha attacks on netted fish in the upper Parana River, Brazil. North American Journal of Fisheries Management, 17, 712-718.
  • Araujo-Lima, C. & Goulding, M. (1997) So Fruitful a Fish: Ecology, Conservation, and Aquaculture of the Amazon's Tambaqui. Columbia University Press, New York, 191 pp.
  • Arratia, G. & Cione, L.A. (1996) The fossil record of fossil fishes of Southern South America. In: Arratia, G. (Ed.), Con- tributions of Southern South America to Vertebrate Paleontology. Special volume of the Munchner Geowissenschaftliche Abhandlungen 30(A), pp. 9-72.
  • Benson, G. (1999) Tandem repeats finder: a program to analyze DNA sequences. Nucleic Acids Research, 27, 573-580.
  • Braga, R.A. (1975) Ecologia e Etologia de Piranhas no Nordeste do Brasil (Pisces-Serrasalmus Lacepede, 1803). Banco do Nordeste do Brasil, Fortaleza, Ceara, Brazil, 268 pp.
  • Braun, E.L. & Kimball, R.T. (2001) Polytomies, the power of phylogenetic inference, and the stochastic nature of molecular evolution: a comment on Walsh et al. (1999). Evolution, 55, 1261-1263.
  • Calcagnotto, D., Schaefer, S.A. & DeSalle, R. (2005) Relationships among characiform fishes inferred from analysis of nuclear and mitochondrial gene sequences. Molecular Phylogenetics and Evolution, 36, 135-153.
  • Castagnoli, N. (2000) Brazil fish culture. In: Stickney, R.R. (Ed.), Encyclopedia of Aquaculture. John Wiley and Sons, New York, pp. 123-128.
  • Cestari, M.M. & Galetti Jr., P.M. (1992) Chromosome evolution in the genus Serrasalmus and cytotaxonomic considerations about Serrasalminae (Characidae, Pisces). Revista Brasileira de Genetica, 15, 555-567.
  • Donaldson, K.A. & Wilson, R. R. (1999) Amphi-panamic geminates of snook (Percoidei: Centropomidae) provide a calibration of the divergence rate in the mitochondrial DNA control region of fishes. Molecular Phylogenetics and Evolution, 13, 208-213.
  • Eigenmann, C.H. (1915) The Serrasalminae and Mylinae. Annals of the Carnegie Museum, 9(3-4), 226-272.
  • Fernandez-Yepez, A. & Ramirez, M.V. (1967) Los caribes (serrasalmidos) de Venezuela y las pesqueras. Trabajos anexos a la Comision Contribuciones al Tema, Ier Foro Internacional sobre Planificacion y Desarrollo Pesquero, Caracas, Venezuela, 25 pp., figures. (mimeo).
  • Fink, W.L. (1988) Evolutionary biology of piranhas. In: Dalrymple, G.H., Loftus, W.F. & Bernardino, F.S. (Eds.), Wildlife in the Everglades and Latin American Wetlands. Abstracts on the Proceedings of the First Everglades National Park Symposium, held February 25-March 1, 1985. Florida International University, Miami, Florida, pp. 13-14.
  • Fink, W.L. (1989) Ontogeny and phylogeny of shape change and diet in the South American fishes called piranhas. In: David, B., Dommergues, J.-L., Chaline, J. & Laurin, B. (Eds.), Ontogenese et Evolution. Geobios, memoire special, No. 12, 167-172.
  • Fink, W.L. (1993) Revision of the piranha genus Pygocentrus (Teleostei, Characiformes). Copeia, 1993, 665-687.
  • Fink, W.L. & Machado-Allison, A. (1992) Three new species of piranhas from Brazil and Venezuela (Teleostei: Characiformes). Ichthyological Exploration Freshwaters, 3, 55-71.
  • Fink, W.L. & Zelditch, M.L. (1995) Phylogenetic analysis of ontogenetic shape transformations: a reassessment of the piranha genus Pygocentrus (Teleostei). Systematic Biology, 44, 343-360.
  • Fink, W.L. & Zelditch, M.L. (1997) Shape analysis and taxonomic status of the Pygocentrus piranhas (Ostariophysi, Characiformes) from the Paraguay and Parana river basins of South America. Copeia, 1997, 179-182.
  • Frailey, C.D., Lavina, E.L., Rancy, A. & de Souza-Filho, J.P. (1988) A proposed Pleistocene/Holocene lake in the Amazon basin and its significance to Amazonian geology and biogeography. Acta Amazonica, 18, 119-143.
  • Gaviria, J.I., Nirchio, M., Granado, A. & Estrada, A. (2005). Karyotype and nucleolar organizer regions of Pygocentrus cariba (Serrasalminae) from Caricara del Orinoco, Venezuela. Interciencia, 30, 44-47.
  • Gery, J. (1972) Poissons characoides des Guyanes II. Famille des Serrasalmidae. Zoologische Verhandelingen Leiden, 122, 134-248.
  • Gery, J. (1976) Les genres de Serrasalminae (Pisces-Characoidei). Bulletin Zoologisch Museum Universiteit van Amsterdam, 5, 47-54.
  • Gery, J. (1977) Characoids of the World. Tropical Fish Hobbyist Publications, Neptune City, New Jersey, 672 pp.
  • Goldman, N. & Whelan, S. (2000) Statistical tests of gamma-distributed rate heterogeneity in models of sequence evolution in phylogenetics. Molecular Biology and Evolution, 17, 975-978.
  • Gosline, W.A. (1951) Notes on the characid fishes of the subfamily Serrasalminae. Proceedings of the California Academy of Sciences, 27, 17-64.
  • Goulding, M. (1980) The Fishes and the Forest: Explorations in Amazonian Natural History. University of California Press, Berkeley, 280 pp.
  • Goulding, M., Carvalho, M.L. & Ferreira, E.G. (1988) Rio Negro, Rich Life in Poor Water. SPB Academic Publishing, The Hague, The Netherlands, 200 pp.
  • Haddad, V., Jr. & Sazima, I. (2003) Piranha attacks on humans in southeast Brazil: epidemiology, natural history, and clinical treatment, with description of a bite outbreak. Wilderness and Environmental Medicine, 14, 249-254.
  • Hubert, N., Duponchelle, F., Nunez, J., Rivera, R. & Renno, J.-F. (2006) Evidence of reproductive isolation among closely related sympatric species of Serrasalmus (Ostariophysii, Characidae) from the Upper Madeira River, Amazon, Bolivia. Journal of Fish Biology, 69, 31-51.
  • Jegu, M. (1992) Variations du niveau marin et distribution des poisons d'eau douce en Amazonie Orientale. In: Prost, M.T. (Ed.), Evolution des littoraux de Guyane et de la zone caraibe meridionale pendant le quaternaire. ORSTOM, Paris, pp. 281-297.
  • Jegu, M. (2003) Subfamily Serrasalminae (pacus and piranhas). In: Reis, R.E., Kullander, S.O. & Ferraris, C.J., Jr. (Eds.), Check list of Freshwater Fishes of South and Central America. Edipucrs, Porto Alegre, Brazil, pp. 182-196.
  • Jegu, M. & Dos Santos, G.M. (1988) Le genre Serrasalmus (Pisces, Serrasalmidae) dans le bas Tocantins (Bresil, Para), avec la description d'une espece nouvelle, S. geryi, du basin Araguaia-Tocantins. Revue d'Hydrobiologie Tropicale, 21, 239-274.
  • Jegu, M. & Dos Santos, G.M. (2001) Mise au point a propos de Serrasalmus spilopleura Kner, 1858 et rehabilitation de S. maculatus Kner, 1858. Cybium, 25, 119-143.
  • Jegu, M., Leao, E.L.M. & Dos Santos, G.M. (1991) Serrasalmus compressus, une espece nouvelle du Rio Madeira, Amazonie (Pisces: Serrasalmidae). Ichthyological Exploration of Freshwaters, 2, 97-108.
  • Kocher, T.D., Thomas, W.K., Meyer, A., Edwards, S.V., Paabo, S., Villablanca, F.X. & Wilson, A.C. (1989) Dynamics of mitochondrial DNA evolution in animals: amplification and sequencing with conserved primers. Proceedings of the National Academy of Science of the United States of America, 86, 6196-6200.
  • Lasso, C.A., Mojica, J.I., Usma, J.S., Maldonado-O., J.A., DoNascimiento, C., Taphorn, D.C., Provenzano, F., Lasso- Alcala, O., Galvis, G., Vasquez, L., Lugo, M., Machado-Allison, A., Royero, R., Suarez, C. & Ortega-Lara, A. (2004). Peces de la cuenca del rio Orinoco. Parte I: lista de especies y distribucion por subcuencas. Biota Colombiana 5 (2), 95-158.
  • Lovejoy, N.R. 1997. Stingrays, parasites, and neotropical biogeography: a closer look at Brooks et al.'s hypotheses concerning the origins of neotropical freshwater rays (Potamotrygonidae). Systematic Biology, 46, 218-230.
  • Ludwig, A., May, B., Debus, L. & Jenneckens, I. (2000) Heteroplasmy in the mtDNA control region of sturgeon (Acipenser, Huso and Scaphirhynchus). Genetics, 156, 1933-1947.
  • Lundberg, J.G., Machado-Allison, A. & Kay, R.F. (1986) Miocene characid fishes from Colombia: evolutionary stasis and extirpation. Science, 234, 208-209.
  • Lundberg, J.G. (1997) Freshwater fishes and their paleobiotic implications. In: Kay, R.F., Madden. R.L., Cifelli, R.L. & Flynn, J.J (Eds.), Vertebrate Paleontology in the Neotropics: The Miocene Fauna of La Venta, Columbia. Smithsonian Institution Press, Washington, D.C., pp. 67-91.
  • Lundberg, J.G. (1998) The temporal context for the diversification of neotropical fishes. In: Malabarba, L.R., Reis, R.E., Vari, R.P., Lucena, Z.M.S. & Lucena, C.A.S. (Eds.), Phylogeny and Classification of Neotropical Fishes. Edipucrs, Porto Alegre, Brazil, pp. 49-68.
  • Lunt, D.H., Whipple, L.E. & Hyman, B.C. (1998) Mitochondrial DNA variable number tandem repeats (VNTRs): utility and problems in molecular ecology. Molecular Ecology, 7, 1441-1455.
  • Machado-Allison, A. (1982) Studies on the systematics of the subfamily Serrasalminae (Pisces-Characidae). Unpublished Ph.D. dissertation, The George Washington University, Washington D.C.
  • Machado-Allison, A. (1983) Estudios sobre la sistematica de la subfamilia Serrasalminae (Teleostei, Characidae). Parte 2. Discusion sobre la condicion monofiletica de la subfamilia. Acta Biologica Venezuelica, 11, 145-195.
  • Machado-Allison, A. (1985) Estudios sobre la sistematica de la subfamilia Serrasalminae. Parte III. Sobre el estatus generico y relaciones filogeneticas de los generos Pygopristis, Pygocentrus, Pristobrycon y Serrasalmus (Teleostei- Characidae-Serrasalminae). Acta Biologica Venezuelica, 12, 19-42.
  • Machado-Allison, A. (2002) Los peces caribes de Venezuela: una aproximacion a su estudio taxonomico. Boletin de la Academia de Ciencias Fisicas, Matematicas y Naturales de Venezuela, 62(1), 35-88.
  • Machado-Allison, A. & Fink, W. (1995) Sinopsis de las especies de la subfamilia Serrasalminae presentes en la cuenca del Orinoco: claves, diagnosis e ilustraciones. Serie Peces de Venezuela, Universidad Central de Venezuela, Caracas, 90 pp.
  • Machado-Allison, A. & Fink, W. (1996) Los Peces Caribes de Venezuela: Diagnosis, Claves, Aspectos Ecologicos y Evolutivos. Collection Monograph 52, Universidad Central de Venezuela, Caracas, 151 pp.
  • Machado-Allison, A., Fink, W. & Antonio, M. E. (1989) Revision del genero Serrasalmus Lacepede, 1803 y generos relacionados en Venezuela: I. Notas sobre la morfologia y sistematica de Pristobrycon striolatus (Steindachner, 1908). Acta Biologica Venezuelica, 12, 140-171.
  • Merckx, A., Jegu, M. & Dos Santos, G.M. (2000). Une nouvelle espece de Serrasalmus (Teleostei: Characidae: Serrasalminae), S. altispinis n. sp., decrite du rio Uatuma (Amazonas, Bresil) avec une description complementaire de S. rhombeus (Linnaeus, 1766) du Plateau Guyanais. Cybium, 24, 181-121.
  • Nakayama, C.M., Jegu, M., Porto, J.I.R. & Feldberg, E. (2001) Karyological evidence for a cryptic species of piranha within Serrasalmus rhombeus (Characidae, Serrasalminae) in the Amazon. Copeia, 2001, 866-869.
  • Nakayama, C.M., Porto, J.I.R. & Feldberg, E. (2002) A comparative cytogenetic study of five piranha species (Serrasalmus, Serrasalminae) from the Amazon basin. Genetica, 114, 231-236.
  • Nico, L.G. (1991) Trophic ecology of piranhas (Characidae: Serrasalminae) from savanna and forest regions in the Orinoco River basin of Venezuela. Unpublished Ph.D. dissertation, University of Florida, Gainesville, 210 pp.
  • Nico, L.G. & Taphorn, D.C. (1986) Those bitin' fish from South America. Tropical Fish Hobbyist, 34 (Feb.), 24-27, 30- 34, 36, 40-41, 56-57.
  • Nico, L.G. & Taphorn, D.C. (1988) Food habits of piranhas in the low Llanos of Venezuela. Biotropica, 20, 311-321.
  • Nirchio, M., Granado, A., Ron, E. & Perez, J.E. (2005). Karyotype and nucleolar organizer regions in Serrasalmus rhombeus (Serrasalminae) from Caricara del Orinoco, Venezuela. Interciencia, 27, 676-678.
  • Norman, J.R. (1929) The South American characid fishes of the subfamily Serrasalmoninae, with a revision of the genus Serrasalmus Lacepede. Proceedings of the Zoological Society of London, 52 (1928), 781-829.
  • Oliveira C., Almeida-Toledo L.F., Foresti F., Britski H. & Toledo-Filho S.A. (1988) Chromosome formulae of Neotropical freshwater fishes. Revista Brasileira de Genetica, 11, 577-624.
  • Orti, G., Petry, P., Porto, J.I.R., Jegu, M. & Meyer, A. (1996) Patterns of nucleotide change in mitochondrial ribosomal RNA genes and the phylogeny of piranhas. Journal of Molecular Evolution, 42, 169-182.
  • Orti, G., Porto, J.I.R. & Sivasundar, A. (2000) Phylogeny of the Serrasalminae (Characiformes) based on mitochondrial DNA sequences. Unpublished poster presented at the 80th Annual Meeting of the American Society of Ichthyologists and Herpetologists, La Paz, Baja California Sur, Mexico (14-20 June 2000). Available from http:// golab.unl.edu/people/asivasun/index.html (accessed 30 May 2005)
  • Palumbi, S.R. (1996) Nucleic acids II: The polymerase chain reaction. In: Hillis, D.M., Moritz, C. & Mable, B.K. (Eds.), Molecular Systematics, 2nd edition. Sinauer Associates, Sunderland, Massachusetts, pp. 205-247.
  • Porto, J.I.R., Feldberg, E., Nakayama, C.M., Maia, R.O. & Jegu, M. (1991) Cytotaxonomic analysis in the Serrasalmidae (Ostariophysi, Characiformes). Abstracts of presentations, Seventh International Ichthyology Congress of the European Ichthyological Union, The Hague, The Netherlands. Bulletin Zoologisch Museum, Universiteit van Amsterdam (special issue), 66.
  • Porto, J.I.R., Feldberg E., Nakayama, C. & Falcao, J.N. (1992) A checklist of chromosome numbers and karyotypes of Amazonian freshwater fishes. Revue d'Hydrobiologie Tropicale, 25, 287-299.
  • Posada D. & Crandall, K.A. 1998. Modeltest: testing the model of DNA substitution. Bioinformatics, 14, 817-818.
  • Raffles, H. & Winkler-Prins, A.M.G.A. (2003) Further reflections on Amazonian environmental history: transformations of rivers and streams. Latin American Research Review, 38, 165-187.
  • Ravago, R.G., Monje, V.D. & Juinio-Menez, M.A. (2002) Length and sequence variability in mitochondrial control region of the Milkfish, Chanos chanos. Marine Biotechnology, 4, 40-50.
  • Ray, D.A. & Densmore, L. (2002) The crocodilian mitochondrial control region: General structure, conserved sequences, and evolutionary implications. Journal of Experimental Zoology, 294, 334-345.
  • Reis, R.E. (1998) Systematics, biogeography, and the fossil record of the Callichthyidae: a review of the available data. In: Malabarba, L.R., Reis, R.E., Vari, R.P., Lucena, Z.M.S. & Lucena, C.A.S. (Eds.), Phylogeny and Classification of Neotropical Fishes. Edipucrs, Porto Alegre, Brazil, pp. 351-374.
  • Ronquist, F. & Huelsenbeck, J. (2003) MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics, 19, 1572-1574.
  • Rubilar, A. (1994) Diversidad ictiologica en depositos continentales miocenos de la Formacion Cura-Mallin, Chile (37- 39°S): implicancias paleogeograficas. Revista Geologica de Chile, 21, 3-29.
  • Saghai-Maroof, M.A., Soliman, K.M., Jorgensen, R.A. & Allard, R.W. (1984) Ribosomal DNA spacer length in barley: Mendelian inheritance, chromosomal location, and population dynamics. Proceedings of the National Academy of Science of the United States of America, 81, 8014-8018.
  • Sazima, I. & Andrade-Guimaraes, S. (1987) Scavenging on human corpses as a source for stories about man-eating piranhas. Environmental Biology of Fishes, 20, 75-77.
  • Sazima, I. & Machado, F.A. (1990) Underwater observations of piranhas in western Brazil. Environmental Biology of Fishes, 28, 17-31.
  • Sivasundar, A., Bermingham, E. & Orti , G. (2001) Population structure of migratory freshwater fishes (Prochilodus: Characiformes) in major South American rivers. Molecular Ecology, 10, 407-418.
  • Slowinski, J.B. (2001) Molecular polytomies. Molecular Phylogenetics and Evolution, 19, 114-120.
  • Stern, K.M. (1970) Der Casiquiare-Kanal, einst und jetzt. Amazoniana, 2, 401-416.
  • Sternberg, H.O. (1975) The Amazon River of Brazil. Geographische Zeitschrift, 40, 1-74.
  • Swofford, D.L. (2002) PAUP*: Phylogenetic Analysis Using Parsimony (*and Other Methods). Sinauer Associates, Sunderland, Massachusetts.
  • Thompson, J.D., Gibson T.J., Plewniak F., Jeanmougin F. & Higgins D.G. (1997) The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Research 25(24), 4876-82.
  • Van Every, L.R. & Kritsky, D.C. (1992) Neotropical Monogenoidea. 18 Anacanthorus Mizelle and Price, 1965 (Dactylogyridae, Anacanthorinae) of piranha (Characoidea, Serrasalmindae) from the Central Amazon, their phylogeny, and aspects of host-parasite coevolution. Journal of Helminthological Society of Washington, 59, 52-75.
  • Walsh, H.E. & Friesen, V.L. (2001) Power and stochasticity in the resolution of soft polytomies: A reply to Braun et al. Evolution, 55, 1264-1266.
  • Walsh, H.E., Kidd, M.G., Moum, T. & Friesen, V.L. (1999) Polytomies and the power of phylogenetic inference. Evolution, 53, 932-937.
  • Winemiller, K.O. (1989) Ontogenetic diet shifts and resource partitioning among piscivorous fishes in the Venezuelan llanos. Environmental Biology of Fishes, 26, 177-199.