Published May 3, 2016 | Version v1
Dataset Open

Kripo GPCR subset

Authors/Creators

  • 1. Nederlands eScience Center
  • 2. Vrije Universiteit Amsterdam
  • 3. BioAxis Research
  • 4. UMC Nijmegen

Description

KRIPO stands for Key Representation of Interaction in POckets, see reference for more information.

Subset of Kripo fragments and distance matrix of all G protein-coupled receptor in the Protein Data Bank. 

  • pdbs.txt -- List of GPCR PDB identifiers
  • kripo.gpcr.sqlite -- Fragments of PDB identifiers
  • kripo.gpcrandhits.sqlite -- Fragments of GPCR PDB identifiers and their most similar fragments from whole PDB
  • kripo.gpcr.h5 -- Distance matrix of GPCR PDB identifiers and their most similar fragments from whole PDB

 

 

Files

pdbs.txt

Files (442.9 MB)

Name Size
md5:dc4af69238586f4bd72e299dcd8aaff5
155.3 MB Download
md5:9a9f7f1dac126349d05b1d20599c697f
1.2 MB Download
md5:1b4d1fb65666e41c1ffe795402e4e5a5
286.5 MB Download
md5:15c1749b3bbaa2e7d22592ed3b333f28
871 Bytes Preview Download

Additional details

Related works

Is compiled by
10.5281/zenodo.50833 (DOI)